Aristolochia californica: 137938931
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Entry
137938931 CDS
T10486
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acak01009
]
137938931
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137938931
Enzymes [BR:
acak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
137938931
Protein phosphatases and associated proteins [BR:
acak01009
]
HAD phosphatases
Fcp/Scp phosphatases
137938931
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
137938931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
137938931
NCBI-ProteinID:
XP_068640148
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MITSVVYQGNSLLGEVDIYPQNPNIDMSNKEIRISHFSPPSERCPPLAVLHTIASFGVCF
KMESKLQSEESPLFSLHSACLRENKTAVVLLGEEELHLVAMSSSKNLEAYSCFWGFNVMP
GLYNSCLIMLNLRCLGIVFDLDETLIVANTLRSFEDRIDALQRKISSEMDPQRISGMLAE
VKRYQDDKNILKQYAENDQVIDNGRVIKVQSEIVLPLSDNHQAIVRPLIRLNERNIILTR
INPAIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPDANLI
NPKELLDRIVCVKSGSKKSLLNVFHNGICHPKMALVIDDRLKVWEEKDQPRVHVVPAFAP
YYAPQAEANNAVPVLCVARNVACNVRGIFFKEFDEGLLQRISDVPYEDNMSDFPSAPDVS
NYLISEDDASVSNGNRDPLSFDGMADTEVERRLKEANCSVQSLPVYSVTNLDVKSNAPSS
LQPVVAPAAGATTLGSQVSNPLHNKHFLNPIASVRQVVPITGGPPPESSMQGSPAREEGE
VPESELDPDTRRRLLILQHGQDTRDQPQSDPPPPPPPPPPFSVRPPQQVPVPPVQSRGGY
YPTLEEDMSPRKLTRGPKEFQLEPEPFHFDKHRPQPPPFFRGFENSAFSERVHENQRLPK
QVHGDDRYHALSNYRSFPGDEMPLGRTSSSSRDLYFESGRAAAVYPETPAGALKEIAIKC
GSKQVEFRPALAGTTELKFLIEVWFIGEKIGEGTGKTRKEAQRKAAESSLKNLADKYLSQ
ISPDPDLNKLSHANENGFMSDSSLLRHPGFSKDEALPIPSTSEQSRFLDQRLERSNTAVS
SISALKELCMVEGLSLDFKQPALSKGSSFDGEVYAEVEVAGQVLGKGTGSTWDEAKLQAA
EEAFGNLNLMLGQFSQKRPGSPRSLQTNPNKRLKSELPLLLQRLPSSMRYSKNGPPVP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcggtggtttatcaagggaattcccttctgggggaagttgatatataccct
cagaacccgaacatcgacatgtcgaacaaggaaattcggatctcacatttctctccgcct
agcgagagatgcccacctttggcagttcttcacacaatcgcctccttcggcgtttgcttc
aaaatggagtccaagttgcagtctgaagaatcgccgttgtttagtttgcactcagcttgt
ctcagagagaacaagactgcagtagttctcctaggggaagaggagctacatttggtggcg
atgtcatctagcaagaatctcgaagcttattcgtgtttttggggttttaatgtcatgcca
ggactttataactcttgtctcatcatgctaaacctaagatgccttggcattgtatttgac
cttgatgaaacactcatagttgccaacacattacgctcatttgaggacagaattgatgct
ttacagcgaaaaataagcagtgagatggacccacagcgcatctctggcatgttagcagag
gtgaagcgttatcaggatgacaaaaatatcttgaaacaatatgccgaaaacgaccaggtc
attgacaacggaagggtgattaaggtccaatctgagattgttctacccttatctgacaat
caccaagccattgttcgccccctcataaggttgaacgagcgaaacattatattaaccaga
atcaatcctgcgattcgtgatacaagtgttcttgtaaggctaaggcctgcatgggaggat
ctcagaagctacttaactgccaaaggccgcaagcgctttgaggtgtatgtttgcacaatg
gctgaaagagattatgctttagaaatgtggaggcttcttgatccagatgctaatttgatc
aatcctaaagaactattagatcgcattgtttgtgtcaaatctggctcaaaaaagtcgctg
ctcaatgtttttcataatgggatatgccatccaaagatggcattggtaattgatgaccgg
ttgaaagtgtgggaagaaaaggatcaacctcgagtccatgttgttcctgcatttgctcct
tactatgctcctcaagcagaggcaaataatgctgtgccagttttatgtgttgcccgcaat
gttgcatgcaatgttagaggtattttcttcaaagagtttgatgagggtcttttacaacga
atttctgatgtgccctatgaagataatatgtctgattttccttctgccccggatgtgagc
aattatttaatatctgaggatgatgcctctgtttcaaatggaaacagagatcccctttct
tttgatggtatggctgacactgaggtggaacgcagattgaaggaggcaaattgcagtgtc
cagtctcttccagtttattctgtgaccaatcttgatgttaagtctaatgctccttcttct
cttcagcctgttgtggctcctgctgccggggcaactactcttggaagtcaagtttccaat
cctttgcataacaaacatttccttaatcctattgcatcagttaggcaggtggttcctatt
actggtggtcctcctccagagtctagcatgcaaggttctcctgctagagaagaaggggaa
gtgccagagtctgaattggatcctgatactagaagacggctgttaatactgcaacatgga
caagatacgagagatcaacctcagagtgatcctccacctcctcctccaccaccgcctcct
ttttctgtccgtcctcctcagcaggttcccgttccacctgttcagtcacgtggtggctat
taccctacattggaagaagatatgagcccaagaaaactcactagaggtcctaaagaattt
caactggagccagaaccctttcattttgataagcacagacctcaacctccacctttcttt
cgtggatttgagaattcagctttttctgaaagagttcatgaaaaccagagactgcctaag
caggtacatggagatgatcgataccatgcactctcaaattatcgttcctttccaggtgat
gaaatgccactaggtcgaacatcttccagcagcagagatctttattttgaatctggacga
gctgctgcagtatatccagaaacacctgcaggagctctgaaagaaattgcaattaaatgt
ggaagcaagcaggtggaattcaggccagctttggcgggtactacagaattgaagtttttg
attgaggtctggtttattggggagaaaataggtgaaggaactggaaaaacaagaaaggaa
gcacagcgcaaggctgcggagagctccttaaagaatttggccgataagtatctatcacaa
atttcaccagatcctgatctcaacaagctttcccatgcaaatgagaatggttttatgagt
gattctagtttgctcagacatccaggattttctaaggatgaagctttgcctattccaagt
acatcagagcaatccaggttcctggatcagaggcttgagagatctaacacagcagtctct
tctatttctgccctcaaagaattatgcatggtggagggcctcagcctcgattttaaacaa
cctgcactttcaaaagggtcaagttttgatggggaagtatacgcagaggttgaagtagct
gggcaagttctagggaagggaactggatcaacatgggatgaagctaagttgcaggctgct
gaagaggcttttgggaatttaaatttgatgcttggtcagttcagtcaaaaacgaccaggt
tctccaaggtcattacagacaaatccaaacaaaaggctgaaatctgagttgcctctgcta
ttgcagcgattaccatcctccatgagatattccaaaaatggaccacctgtgccttga
DBGET
integrated database retrieval system
