KEGG   Aristolochia californica: 137939438
Entry
137939438         CDS       T10486                                 
Name
(GenBank) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
acak  Aristolochia californica
Pathway
acak03013  Nucleocytoplasmic transport
acak04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137939438
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    137939438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acak03019]
    137939438
   04131 Membrane trafficking [BR:acak04131]
    137939438
Messenger RNA biogenesis [BR:acak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137939438
Membrane trafficking [BR:acak04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    137939438
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    137939438
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    137939438
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR55 Beta-prop_WDR19_1st Beta-prop_TEP1_C EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP WD40_2 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 137939438
NCBI-ProteinID: XP_068640805
LinkDB
Position
Unknown
AA seq 304 aa
MPTQKIESGHQDVVHDAAMDYYGKRLATASSDNTVKIIGVTTSSHQHLATLTGHIGPVWQ
VSWAHPKFGSILASCSYDARVIIWKETPQNEWIQAHVFTDQKSSVNSIAWAPHELGLCLA
CGSSDGSVSVYTARSDGGWDKATIDQAHLVGVTSVSWAPATAPGALVGGSGGALDQPVQK
LVSGGCDNTLKVWKLSNGNWKMDCFPALQKHSDWVRDVAWAPNLGLPKSTIASASQDGTV
VIWTVAKEGGQWEGRLLKDFNTPVWRVSWSLTGNLLAVADGNNNVTLWKESVDGEWQQVT
TVEP
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcctactcagaagattgaatcaggtcaccaagatgtggtccatgatgcagctatggat
tactatggcaagcgccttgccactgcctcttcggacaacactgtgaaaattatcggggtc
accacttcctcccaccagcaccttgccactctcacaggtcacattggccctgtctggcag
gtctcctgggctcaccctaaattcggatccatactagcctcctgctcctatgatgcacgt
gtcatcatctggaaggaaacccctcaaaatgagtggatccaggctcatgtctttaccgat
cagaaatcctccgttaattccattgcttgggccccccatgagcttggtctttgtctcgct
tgtggatcttctgatggcagtgtctctgtctacactgctagatctgacggtggatgggat
aaggccaccattgaccaagcccatctagtaggagttacatctgtctcatgggcgccagcc
actgcgccaggtgcgcttgtgggtgggtctggcggggctcttgatcagccggttcagaaa
cttgtctcaggtggttgtgataataccctgaaggtctggaagctctctaatggtaattgg
aagatggactgtttcccagcactacaaaagcatagcgactgggttagggatgttgcctgg
gcaccgaatctaggactacccaaatccaccattgctagtgcttcacaggatgggacggtt
gtgatctggactgtggccaaagaagggggtcagtgggaagggaggcttttgaaggatttt
aatacaccggtttggagggtttcctggtcgcttactgggaatttgttggctgtggctgac
gggaataacaatgtgacattgtggaaagaatctgtagacggagaatggcagcaggtcaca
actgttgaaccctag

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