Aristolochia californica: 137940372
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Entry
137940372 CDS
T10486
Name
(GenBank) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acak04131
]
137940372
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acak04147
]
137940372
Membrane trafficking [BR:
acak04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
137940372
Exosome [BR:
acak04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137940372
Exosomal proteins of bladder cancer cells
137940372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Zn_ribbon_19
ENTH
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
137940372
NCBI-ProteinID:
XP_068641505
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHNKRPWILASLHTGVIQLWDYRVGTLIDRFDEHEGPVRGVHFH
NSQPLFVSGGDDYKIKVWNCKLHRCLFTLLGHLDYIRTVQFHNECPWIISASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQVIRVWDISTLKKKTVAPADDVLP
FSQMNTELFGGVDCVTKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTMRGHMNNVSCVLFQPKQDIIVSNSEDKSIRVWDLTKRTALQTFRRDHDRFWILAAHP
EMNLFAAGHDSGMVVFKLERERPAFSVSGDSLYYVKDRFLHFFEFSTQRDIQLIPIRRPG
STSLNQGPRTLSFSSTENAVLICSDLDGGSYELYNIPRENAGRGDNLQESKRGVGSSATF
VARNRFVVLDRSNNQALVKNLHNEIVKKSNLPIVCDGIFYAGTGNLLCRAEDKVVIFDLQ
QRTIIGELQTPCVKYVIWSNDLENVALLSKHAIVIANKRLVHRCTLHETTRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDNGIIRTLDDPIYITKILGSTIYCLDRDRKNQIILIDSTEYI
FKLSLLKRRYDHIMSMIRGSQLCGQAMIAYLQQKGFPEVALHLVKDERTRFNLAIESGNI
QTAVASAKEIDGTDHWYRLGIEALRQGNASYVEYAYQRTKNFERLSFLYLITGNIEKLSK
MLKIAEIKNDVMGQFHNALYFGDIRERVKILESAGHLPLAYITAAVHGLTEEAEKLSAEL
GGKVPSLPERKVPMLLLPPQPILSGGDWPLLRVERGIFEGALDAITGAGAEDEEAAGASW
GEDLDIDEHDVQNDNGASVIEDGVPKEEEDGEGGWDLEDLNDLGLPADVDSPKTMASSHS
FVFVAPMPGKSVNQTWIERSSLAGEHVAAGNFDTAMRLLSRQLGIKNFAPLRPLFLEIHT
GSQSYLGAFASTPVLPLAIGKELIESNSNMQTAPALVYRFSQLDEKLKSAYKFTTEGRFG
EALRLFLQILHTIPLIRVDSRREVDEVKELISIVKEYALGLRMEVRRKEIKDDPIRQQEL
AAYFTHCNLQKTHLRLVLMNAMGVCYKGKNYNSAASFANRLLETNPPNENQVKKARQVLQ
ACAKENMKDTYQLNYDFRNPFVICGATFVPIYHGQKDVACPYCGSRFVPYIEGQICSVCD
LAVVNADASGLFCSPSQVR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacgaagagcaatagggttaagggtctgagctttcacaacaag
cggccatggatactggcaagtctacatactggggtgatacagctctgggactacagagtg
ggaactctaatcgatcgatttgatgagcatgagggacccgtccgaggggttcacttccat
aattctcagccgcttttcgtttctggaggcgatgattacaagatcaaagtctggaattgt
aagctgcatcgctgtctatttactctgctagggcaccttgattacatccgcactgttcaa
tttcataatgagtgcccctggataattagtgcaagtgatgatcaaactattagaatatgg
aattggcaatcacgcacttgcatttctgttttaactggtcacaatcattatgtgatgtgt
gcatcctttcatcctaaagaagacctagtggtatcagcttcactggaccaagtaatccgt
gtttgggatatcagtaccctcaaaaagaagactgtggctccagctgatgatgttcttcct
ttcagtcaaatgaacacagaattatttggaggggttgattgtgttactaagtatgtctta
gaaggtcatgaccgtggggtcaattgggcttcttttcatcccagcttgcctctaattgtg
tctggagctgatgatcgccaagttaaattatggaggatgaatgatactaaggcttgggaa
gtagacacaatgagagggcacatgaataacgtgtcttgtgtactgttccaaccaaagcag
gacattattgtatcaaactcggaggacaagagtatacgtgtatgggatttgacaaagcga
actgctctgcagacattccgtagggatcatgacaggttttggattcttgctgcccatcct
gaaatgaacctttttgcagctggtcatgatagtggcatggttgtcttcaagttggagcgc
gaaaggccagctttttcggtgagtggtgattcattatactatgtcaaggatcgatttctt
catttctttgagttttctacccaaagagatatacagctgattccaatccgacggcctggt
tccaccagcttgaatcaaggaccaagaactctctcatttagttccacagagaatgctgtc
ttgatttgttcagatctggacggagggtcatatgaactttacaacataccccgtgaaaat
gctggcagaggtgataatttgcaagaatcaaaaagaggagttggtagttctgccactttc
gtggcacggaataggtttgtcgtacttgataggagtaacaaccaagctcttgtgaagaac
cttcataatgagatcgttaagaaaagcaatctcccgattgtctgtgatggaattttctat
gctggtacgggcaatttgttgtgcagggcggaggataaggttgttatctttgatctccag
cagaggaccatcattggggaactccagaccccctgtgtgaagtatgttatttggtccaac
gacttggaaaatgttgctttgcttagcaaacatgccattgttattgcaaataaaagactt
gtgcatcgatgtacccttcatgagacaactcgggtgaaaagtggtggatgggatgataat
ggtgttttcatatatacaacccttaaccatattaagtattgtcttccaaatggagacaat
ggaattatccggacccttgatgatcctatttacatcacgaagattttggggagtaccatt
tattgcttggaccgagatcgaaagaaccaaatcattttaattgattcaacggagtacatt
tttaagctttccctgctaaaaaggagatatgatcacattatgagcatgatccggggctca
cagctctgtgggcaggccatgattgcttatctgcagcagaagggttttccagaagtggct
cttcaccttgtgaaagatgagagaactcgattcaacttggcaatagaaagtggtaacatc
cagactgcagtcgcttcagcaaaggagatcgatggaacagatcattggtacaggttaggc
attgaggccctcaggcaagggaatgctagctatgtggagtatgcatatcagaggacaaag
aactttgagaggctgtcatttctgtatctcataacaggcaacatagagaaactatcaaag
atgttgaagatagcagagattaaaaacgatgtgatgggtcagttccataatgccctgtac
tttggtgacattcgtgagcgagtcaaaatcctagaaagtgctggtcatttgcctcttgct
tatattacagctgcagttcatgggctcacagaagaagctgaaaagctttcagcggagttg
ggagggaaagttccatctctgccagaaagaaaggttcctatgctactcttgccacctcaa
cctattctctctggtggagactggcccctgcttagagttgagagaggtatttttgaaggg
gcgcttgatgctatcactggtgcaggagctgaggatgaagaagctgctggtgccagctgg
ggtgaagatttggacatagatgagcatgatgtgcaaaacgacaatggtgcctcagtcatt
gaagatggggtacccaaggaagaggaagatggagaaggtggatgggaccttgaggacctc
aatgatttaggattgcctgctgatgttgatagcccaaaaactatggccagttctcattct
tttgtctttgttgctcccatgcctggtaaatctgtaaaccagacctggattgaaagatct
tctcttgcaggggagcatgtggccgctggcaattttgatacagcaatgcgtttattgagc
cggcaattgggcattaaaaactttgcccctttgaggcccttgttcttagaaattcacaca
ggtagtcagagctatcttggtgcatttgcttcaactccagtgctccctttggctattggg
aaagaattgatcgagtcgaactctaatatgcagactgcacctgcacttgtgtacagattt
tctcagttagatgagaaactcaaaagtgcttacaagttcactacagagggaaggttcggt
gaggcattgaggcttttcctccaaatactgcacaccattccattaattcgtgttgattca
aggagagaggtggatgaagttaaggagttgatctcaatagtgaaggaatatgcgttaggc
ttgaggatggaggtcagaaggaaagagatcaaggatgatccaatacgtcaacaggaattg
gcagcctacttcacacactgcaatcttcaaaaaacacacctgaggctggtcttgatgaat
gctatgggcgtttgctacaagggtaaaaactataactcagcagctagttttgctaacagg
ctcttggagacaaatcctcctaatgagaaccaagtcaagaaggcccgacaagtcctgcaa
gcttgtgccaaggaaaacatgaaagacacatatcagctaaactatgatttcaggaatcca
tttgtgatctgcggtgccacatttgtgccaatttaccatggtcagaaagatgtggcatgt
ccatattgtgggtctcgatttgtaccatacattgaagggcagatatgttccgtttgtgat
ttagctgttgtcaatgcagatgcatcaggacttttctgttcaccttctcaggtaagatga
DBGET
integrated database retrieval system