Aristolochia californica: 137940902
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Entry
137940902 CDS
T10486
Name
(GenBank) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
acak03083
Polycomb repressive complex
Brite
Enzymes [BR:
acak01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137940902
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
137940902
HDAC complexes
Sin3A-HDAC complex
137940902
BRAF-HDAC complex
137940902
REST complex
137940902
SHIP complex
137940902
MiDAC complex
137940902
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
137940902
Heterochromatin formation proteins
Other heterochromatin formation proteins
137940902
Chromatin remodeling factors
NuRD complex
137940902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137940902
NCBI-ProteinID:
XP_068642117
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSKFREELPYQLPPLTFYPALTSFSSLMAASSSFGGGASEPPSGASLPSPSAPDARKRLV
SYFYEPSIGDYYYGQGHPMKPHRIRMAHNLVVHYSLHRLLQISRPFPASPADIGKFHSDD
YVDFLAAATPRTVSSHQRHFKRFNVGEDCPVFDGLWGFCRASAGGSIGAAVKLNRKDADI
AINWAGGLHHAKKCEASGFCYVNDIVLGILELLKVHRRVLYVDIDIHHGDGVEEAFFTTD
RVMTVSFHKFGDYFPGTGHLKDIGYGSGKYYALNVPLNDGMDDESFCGLFRPVIQKVMEV
YQPDAVVLQCGADSLAGDRLGCFNLSVRGHADCLRFLRSFNVPLMVLGGGGYTIRNVARC
WCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIAPSNMENQNAPRDLEKMRSVLLEQLS
KVQHAPSVQFQARPPETEPPEEEEDHMEQRPKPRIWDGEYFESDSEEDPKPQPHNGDHVM
LDSETCSKAETKEEDA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattccgagaggagttaccttaccagttacctcccctcactttctaccctgct
ctgactagcttttcttctctcatggcggcctcctcctcgtttggcgggggagcttccgag
ccgccttccggcgcttccctgccgtccccgtcagcgccggacgccaggaagcggctcgtt
agctacttctacgaaccctccatcggcgattactactatggtcagggtcaccctatgaaa
cctcatcgtattcgaatggctcataacctcgtcgtccattattcccttcaccgtctcctt
caaatctcccgccctttccctgcctcccccgccgacataggaaagttccattccgacgac
tacgtcgatttcctcgccgctgccactccacggaccgtctcttcccaccaaaggcacttc
aagcgcttcaacgtcggtgaagactgcccagtctttgacggtctttgggggttttgccgc
gcatctgcgggtggctccattggcgccgccgtgaagctcaatagaaaggacgcggatata
gccataaattgggccggtggattgcatcacgcaaagaagtgcgaggcctccggtttttgt
tatgttaacgacatcgtgctgggcattcttgaactgctcaaggttcataggcgtgttctg
tatgttgatattgacattcaccatggagatggtgtggaagaagcttttttcacaactgat
agggtcatgacagtttctttccataagtttggagactattttccaggcacaggccatctt
aaggatattggatatggctctggcaaatactatgctctaaatgtgcctttgaatgatgga
atggatgatgaaagtttctgtgggctctttagacctgtaatccagaaagtaatggaagtt
tatcaacctgatgcagtagtgcttcagtgtggggctgattctttggctggtgataggttg
ggttgcttcaacctgtcagtgaggggccatgcagattgccttcgtttcttaaggtcattt
aatgtgcccctgatggtcttaggtggtggaggttataccatccgtaatgttgcccggtgc
tggtgttatgagactgcagttgcagttggtgttgagcctgataataagctgccttacaat
gaatactatgagtactttggccctgactatactcttcacattgcacctagcaacatggag
aatcaaaacgcaccaagagatttagaaaagatgaggagtgtgttgttagagcagctctca
aaggtacaacatgctcctagcgttcaatttcaggcaagaccaccagagacagaacctcca
gaagaggaggaagatcatatggagcagaggccaaaacctcgaatatgggatggggagtat
tttgaatcagattctgaagaagaccccaagcctcaacctcacaatggtgaccatgtcatg
ctggattctgaaacgtgcagcaaggccgaaaccaaagaagaagatgcatga
DBGET
integrated database retrieval system
