| Entry |
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| Name |
(GenBank) general transcription and DNA repair factor IIH helicase/translocase subunit XPB1-like
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| KO |
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| Organism |
acak Aristolochia californica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:acak00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137941103
09124 Replication and repair
03420 Nucleotide excision repair
137941103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:acak03021]
137941103
03400 DNA repair and recombination proteins [BR:acak03400]
137941103
Enzymes [BR:acak01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137941103
Transcription machinery [BR:acak03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137941103
DNA repair and recombination proteins [BR:acak03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137941103
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
772 aa
MAGHGEKGRPSKKLKFFSKEDDRNAVADDDLDYAEDFDEFRREDETEPKKRDFTKLELKP
DHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV
GLETETIVAVLNKLSKTKLPKEMIDFIYASTSNYGKVKLVLKKNRYFVESPLPEVLKTLL
RDDVISKARIYSNEGSKGSDAFSVSKILGEIESSGHEELLEGANVAAAAEEKETHAFEID
PAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLNMELKPQAQPRPYQEKSLSKMFGNG
RARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICR
FTSESKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHM
FRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEV
WCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIQFHEQQRGDKIIVFADNLFAL
TEYAMKLKKPMIYGATSHHERTRILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISS
HAGSRRQEAQRLGRILRAKGKLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLID
QGYSFKIITSLPPPDSGAELHYHRLDEQLALLTKVLNAGDDAVGLEQLEEDADDITLLKA
RRAVGSMSAMSGAKGMVYMEYSTGRGKQAGHGQVKKPKDPAKRHQLFRKRYG |
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| NT seq |
2319 nt +upstreamnt +downstreamnt
atggcgggtcacggcgaaaaaggtcgtcccagtaagaagctcaagtttttctcgaaggag
gatgaccgaaatgctgttgctgacgatgatctggattacgcggaagattttgatgaattt
cgtcgcgaagatgaaacggagccgaagaagagagatttcactaagctagaactgaagccc
gatcatggaaaccgccctctgtgggcttgcgctgatggcaggatctttctcgagacattc
tccccattgtacaagcaagcgtatgatttcctcattgccattgccgaacccgtttgccgg
cctgagtctatgcacgagtataacttgacgccccattccttgtacgctgctgtctctgtt
gggcttgaaactgaaacgatagttgccgtcttgaataagttatcaaagactaaactccca
aaagagatgattgattttatttatgcttccacttccaattacgggaaagtaaaacttgtg
ttgaagaagaaccgttactttgtggaatcccctttgcctgaggtactgaagaccttgctt
agggatgacgtcatatctaaggcaagaatttattccaatgagggttcaaaaggaagtgat
gcattttctgtcagcaaaattttgggtgaaatagaaagtagcgggcatgaggagttgctc
gaaggagctaacgttgcagctgctgctgaagagaaagaaactcatgcttttgaaattgac
cctgctcaggtagaaaatgtaaagcaaaggtgcttaccaaatgcgttaaattatcctatg
ttggaggagtatgacttcagaaatgacaatgtgaaccctgatttgaacatggaattgaag
cctcaggcacaaccccgtccataccaggaaaagagtttgagtaaaatgtttggaaatggt
agagcaagatctggcattattgtgctcccttgtggagctgggaagtctctagttggtgtt
tctgcagcctgtcgaattcgaaagagctgcctttgcttagcgacaaatgccgtttctgtg
gaccaatgggctttccagttcaagttgtggtccaccatccgagatgaccaaatttgccgt
ttcacatctgaaagtaaagagaggttccgtggcaacgctggggtggttgtgacaacttac
aacatggttgcatttggtgggaaacgatctgaggaatctgagaagatcatagaggagatg
agaaaccgggaatggggattacttctaatggatgaggtgcatgtggtccctgcacatatg
tttcgaaaggtcatcagtatcaccaaatctcactgcaaacttggactaactgcaaccctt
gtcagagaggatgaacgtataacagatttgaacttcctcattggccccaaattatatgag
gcaaactggttggatcttgtaaagggagggttcattgcaaatgttcagtgtgccgaagta
tggtgtccaatgacaaaggaatttttcgcagaatatttaaaaaaggaaaattctaaaaaa
aagcaggctttgtatgtaatgaacccaaataaattccgggcatgcgagtttctcatccag
tttcatgaacaacagcgtggtgacaagattatcgtatttgctgataatctttttgccctt
actgaatatgctatgaaactcaagaaaccaatgatctacggtgcaaccagccaccatgag
aggacacgaatcctctatgcattcaagcatagtcctgatgtaaacactgtttttctctcc
aaggtgggagataactccatagatattcctgaggctaatgtaattatccagatctcatct
catgctggttctcggcgtcaagaagcccagcgacttggccgtattctgagagcaaagggt
aaacttcaagatcggctggcaggaggtaaagaggagtataatgccttcttctactcactg
gtatccacagacacacaggagatgtattactccactaaaaggcaacaatttttgattgac
caaggttatagcttcaagatcattacaagcttgcctccacctgattctggagctgaactc
cattatcatcgacttgatgaacaacttgcacttctcactaaggttttaaatgccggcgat
gatgcagttggtttggagcaattagaagaagacgctgatgatatcactctccttaaggcc
cgccgagctgtgggctcaatgagtgcaatgtctggtgcaaaaggcatggtctacatggag
tacagcactggacggggcaagcaggctgggcacggtcaggtgaaaaagccaaaagatcca
gcaaaaaggcatcagctatttagaaaacgttatggttaa |
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