Aristolochia californica: 137941160
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Entry
137941160 CDS
T10486
Name
(GenBank) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137941160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SLFN-g3_helicase
AAA_22
HDA2-3
Motif
Other DBs
NCBI-GeneID:
137941160
NCBI-ProteinID:
XP_068642552
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MEEDDHLTSSSSSTSEDEDGEEELKGDCSKEDQEDETDTEFVVDSPTSDDDVKSKNVAAL
VRGNLVVKRQSLLPRVLSVSEGAAVARKPFKPPCLNGYRDQNEELIRRLWARKRFVPWGS
LRPALVTISNRVNIPQIIEEDNLEEVKSLPPGVEPLVLWHPEDSDEEGPPLTPIVVDPLL
VRFLRPHQREGVLFMFTCVSGILSSAGISGCILADDMGLGKTLQSITLLYTLLCQGFDGK
PMVGRAMIVTPTSLVSNWESEIYKWVGTRIQLISLCESSRADVVSGIDSFLSPSSPFKVL
IISYETFRMHSSKFEKSGSCDLLICDEAHRLKNDQTLTNRALASLSCRRRVLLSGTPMQN
DLEEFFAMVNFTNPGILGDAAYFRRYYDSPIISGREPCATADARKLGIERSTELSAKVNQ
FILRRTNTLLSNHLPPKIVEVVCCKLTPLQSELYSYFVQSKNFTQAVVEEMKQSKILAYI
TALKKLCNHPKLIYDTIRNGGAGTVGLEGCLRFFPPELFSGRSGSWTGGHGIWVELSGKM
HVLARLLAHLRQKTNDRIVLVSNYTQMTFIYIYQTLDLFSQLCRERRYPYLRLDGTTSIG
KRQKLVNRFNDPSKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRD
GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQMDTVTQQENFLSREDLRDLFT
FHANVRSEIHENLNCMRCKLIDLNVEADRCDAEEKHTNDSTRGTVANMEMPDIGGFAEVA
GCLYKLKSSEKQVGTPLEEDLGSWGHHFYPTTVPDVIFQASAGDEVTFVFTNQVDGKLVP
VESTENQKTQGFRGRSIEQKSNVLPQQSRVLSPVTQIRAPFSISKEDLAEKSALPLSKST
QEDPAKITKPALKGIRTPRKSKTVIDAKLSHKRFPDDFDRSDDDFM
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatgaccacctaacttcttctagttcctctacctccgaagacgaggatggg
gaagaagagttgaagggagattgcagtaaggaagaccaggaggatgagacagatacggaa
ttcgtcgtggactctccaacgtccgatgacgatgtaaaatcgaagaatgttgctgctctt
gtgagaggcaatctagttgttaaaaggcagtcgctacttccccgagttctttctgtctct
gaaggagctgctgtggccagaaagcctttcaaacccccttgtttaaatggatacagagac
cagaatgaagaacttattcgtcgactttgggcccgtaaaagatttgttccatggggttcc
ttgagaccggcgctggtaacgataagcaaccgggtgaatattcctcaaattattgaggaa
gataacttggaggaagttaagtctcttccacctggtgtcgagcctttagttttatggcat
ccagaggattctgatgaagaaggccccccattgacaccgatagttgtcgatccattgctg
gtgcgctttctccggcctcaccaaagagaaggtgtgctgttcatgttcacatgtgtttct
ggtatactcagttctgctggaatatctggttgtattctagcagatgatatggggttaggg
aagactctacagtccatcactttgctgtacactcttctttgccagggttttgatggaaag
ccaatggtcggaagggccatgatagtgactcccactagccttgtcagtaattgggagtct
gaaatttacaaatgggtgggaacaagaatccagcttatttctctctgtgaaagttccaga
gctgatgttgtctctggaattgacagtttcctgagcccttcaagcccattcaaggtactt
attatttcttacgagacattccggatgcattcctcaaaatttgagaaaagtggaagttgt
gaccttctaatttgtgatgaagctcataggttgaaaaatgaccagacattaactaaccga
gcattggcttctctttcatgcagacgccgtgttcttttatcaggaacacctatgcaaaat
gacctggaggagttctttgctatggttaatttcactaatcccggaatactgggagatgca
gcttatttccggcgttactatgattccccaattatttctggaagagaaccctgcgctaca
gcagatgcgagaaagttgggcattgagcgttcgacagaattaagtgccaaagttaatcag
tttatattgaggaggacaaacactttactatcaaatcacttacctccaaaaatagtggaa
gttgtttgttgcaaactgactccccttcagtcagaattatatagctattttgtacagtca
aaaaattttacccaagcagtggttgaggaaatgaagcagtccaaaattcttgcatatatt
actgctttgaaaaagctatgcaaccatccaaagctcatttatgatactattcgaaatggg
ggtgctggtactgtgggtttggagggttgtttacgttttttccctccagaactattttct
ggaagatcagggtcatggactggtggtcatgggatttgggtagaactttctggaaagatg
catgtcttagctcgattactggcccatctgcgacagaaaacaaatgatcggattgtacta
gtttcaaactatactcagatgaccttcatttatatctatcagaccctggatctgttttct
caactctgtcgtgaaagaagatacccatacttaaggcttgatggaaccacttctattggc
aaaagacaaaagctggtcaatcgtttcaatgacccttctaaggatgaatttgcatttctc
ttaagtagtaaggctggtggttgtgggcttaacctgattggtggcaaccgtctagtcctg
tttgatcctgattggaatccagctaatgacaagcaggctgctgcaaggatatggcgggat
gggcagaagaagagagtatatatatatagatttttaagtactggaacaattgaagagaag
gtctaccaacgtcaaatgtcaaaagaagggctccagaaagttattcaacaggagcaaatg
gatactgtgacacaacaggaaaatttcctgtcaagagaagacctacgcgatctcttcact
tttcatgcaaatgtcaggtctgagatacatgaaaatctgaattgtatgcgctgtaaattg
attgacttgaatgtggaggctgaccgatgtgatgcagaagagaaacatactaatgattca
accagaggaactgtagctaatatggaaatgcctgatataggtggatttgctgaggtagct
ggatgcttatataagttaaaaagctcagagaaacaggtggggacacctcttgaagaggat
ttgggaagttgggggcaccatttttatcccacaacagtccctgatgtaatttttcaagca
tcggctggtgatgaggtgacatttgtttttacgaaccaagtagatgggaaacttgttcct
gtagaatcaactgaaaatcagaagactcaaggattcagaggcagaagtattgagcaaaaa
tcaaacgtgttacctcaacaatcacgtgtattgtctccagttacccagataagagctccc
ttttccatatccaaggaagatcttgctgagaaatcagcacttcctttgtctaaatccaca
caagaagatccagctaaaataacaaaaccagcactgaaaggcatacgtacaccaagaaaa
tctaaaacagttatcgatgctaaattgtcccataaaaggtttccagatgattttgatcga
agtgatgatgattttatgtaa
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