Aristolochia californica: 137941247
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Entry
137941247 CDS
T10486
Name
(GenBank) uncharacterized protein isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
acak03015
mRNA surveillance pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137941247
09122 Translation
03013 Nucleocytoplasmic transport
137941247
03015 mRNA surveillance pathway
137941247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137941247
03041 Spliceosome [BR:
acak03041
]
137941247
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137941247
Spliceosome [BR:
acak03041
]
Complex C
Other components
EJC/TREX
137941247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
CTD10
Motif
Other DBs
NCBI-GeneID:
137941247
NCBI-ProteinID:
XP_068642672
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSSNYVVLDNRPINQWKVTELKEELKRRKLVTRGLKEDLVRRLDAAIQSEMEAVKEKLEN
DVVNPLLMSQVMSNEDKIDKQTVDSSMRSVASNSEKANDDVTMVDIDINNADTGQEAKVQ
ELESSSGIDANDVAQDATENVMAMETSAVDNQGMLNQEELGGEKELKNNDILREDEKTSN
PSPSEDVKPSIFGDPNDNQVSKVSPVLDTFYVSISEKNELKDNLNADNFCLELENIKPDK
VVQELSSNVTPSVGDILPSLDDDQESGENQASAGMTDNINASNVNPSKKNDGADGGDVDK
SEIAESHALKLDSSVDVVTDSSPEKKNALNEKNNQEIASEKRKLEDKETPVNNEPVKRQR
RWNSEALRLSESQNLSQTPLSTPHDTFPPKLTFNRFNSTNGRDTPKERIVPPSQKPTTNF
LRIDHFLRPFTLKGVQELLAKTGTVTDFWMDHIKTHCFVTYSSVEEAIDTRNALYNLQWP
PKGGRLLVAEFVDAQEVESHLEAPTSPAQVSTLTMPSTPEAPIQTPHQNALRQHLPSPPS
LPPPPPPILESPPAREKVTLLPPPPKKPDPPIVTLDDLFKKTKSTPRIYYLPLSKEQVVA
KHAAQGKKSVRQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaattacgtggtgctcgacaatcggcccattaatcaatggaaggtgacggag
ctgaaggaggagctcaagaggcggaagctggtgacaaggggtttaaaggaggatctagtg
agacgactggatgcagccattcagagtgagatggaagctgttaaagaaaaattggaaaat
gatgttgtaaatcctcttttaatgtcccaagttatgtcaaatgaagacaagattgataaa
caaactgttgatagttctatgagaagtgttgcaagcaatagtgaaaaggctaatgatgat
gtcaccatggttgacatagatattaataatgctgacactggtcaggaagctaaagttcaa
gaattagagtcaagtagtggtattgatgcaaatgatgtggctcaagatgcaactgagaat
gtgatggcaatggaaaccagtgcagttgataaccaaggtatgcttaaccaggaagaactt
ggtggggaaaaagagttgaagaataatgacatcctgagagaggatgaaaaaacttcaaac
ccttccccttctgaagatgtcaagccctccatttttggtgatccaaatgataaccaggtc
tctaaggttagtcctgttttagatactttttatgtatcaattagtgaaaagaatgaacta
aaggataatttgaatgctgataatttctgtttagaactggaaaatattaagccggataag
gtggtgcaagaactatcatccaatgtgaccccttctgtgggtgacattcttccttcattg
gatgatgatcaagagtctggtgaaaatcaggcttctgcagggatgactgataacataaat
gcttcaaatgtcaaccctagcaagaaaaatgacggtgcagatgggggtgatgtggataaa
agtgagattgccgagtcccatgctttgaagttggatagctctgttgatgtggtgactgat
tcctctcctgagaagaagaatgctctcaatgaaaagaacaatcaggagattgcctctgag
aaaagaaaactcgaagataaagaaacaccggtgaacaatgagcctgtgaagaggcagaga
cgatggaactctgaagcactcagactttctgaatcacaaaatttgagtcagaccccatta
agtacacctcatgatacatttcctcctaagcttacatttaatcggttcaactccacaaat
ggcagagataccccaaaggagcgtatcgtgccaccatcacagaagccaacaacaaatttt
ttgagaatcgatcattttctgcgtccatttactctgaagggtgttcaggagctacttgca
aagactgggactgtgaccgacttttggatggatcatattaagactcactgctttgtaaca
tattcatcagttgaagaagcaatagatacccgaaatgccctgtacaatctgcaatggcct
cccaaaggaggacgtctgcttgtggcagaatttgtggatgctcaggaagtagagtctcat
ctggaagctccaacatctccagcacaagtaagcactctgacaatgccgtcaacaccggag
gccccaatccaaactcctcatcagaatgccctcaggcagcacctaccgtcgccaccttct
cttccaccaccaccaccaccgatattagagtcacccccagccagagaaaaggttactctt
ctaccaccacctccaaagaaaccagatccgcctattgttacacttgatgatctcttcaag
aaaacaaaatctaccccaagaatctattacttgcctctatccaaagaacaggttgtagca
aagcatgcagcacaaggcaaaaagtccgtgcgccagtga
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