KEGG   Aristolochia californica: 137942136
Entry
137942136         CDS       T10486                                 
Name
(GenBank) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
acak  Aristolochia californica
Brite
KEGG Orthology (KO) [BR:acak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acak03036]
    137942136
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:acak04812]
    137942136
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     137942136
   Microtubules and associated factors
    gamma-tubulin ring complex
     137942136
Cytoskeleton proteins [BR:acak04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     137942136
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WD40 Beta-prop_RIG_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Aladin WD40_Gbeta Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_VPS8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Shugoshin_N NYD-SP28_assoc
Other DBs
NCBI-GeneID: 137942136
NCBI-ProteinID: XP_068643934
LinkDB
Position
Unknown
AA seq 805 aa
MNLMDLSTTFLAACGGDTVKVFDISKQPNDPCTLTYSPSPGSQVNSVKWNHTNFVVASAG
DDKKISLWRKNGQSMGTLPASESEAGDNIDESILAISFSNKGSRYLCSGGSGQVVRIWDL
QRKRCIKWLRGHTETITGVMYNCKDEHLASISLKGDLILHNLASGVRAAELKDPDEQVLR
VLDYSRISRHVLVTAGDDGSVHLWDTTGRNPKISWAKQHSAPTTGVCFSPSNDKVIASVG
LDKKLVIFDSGTRRPTSSVSYEAPFSSIAIRDDGWTLAAGTNTGRVVFYDVRGKPQPTTV
LRAFSSSEAVTSLCWQRSKPIIITQSNCTPETVLLGGSGEDSVLMPDQLPSTTSTSLSSA
TVGTGSRGSGRLVSLSDTSILTTTNSGVLSSTSHLSTEETPQRNHLWTGAALGRLQATRT
GFNFSDDMDVFSPLVEVQPIAPSLGHWWDDKEEVKKDSGAVDKKSTVLPSSSRRFAFSED
GNTDHSISDWKSYSITRQVQEDSQSTSSPLSSTPVTSLKSDQSFSPTPPEAWGANPPDKF
GQIRSQSKPSRFMPASSQTSFSLASGSLFSGLQESSLSTSQTTISSLLNTSLNSTNLQSR
DIFNYEIASGLSESSSAFSSISTTSLGSKNSTGSANLDLPGSQHLSLPRRFSTYTERIST
ASSFSEVGLGKASPKLKKTGAETREELMNSALSRFDTSTAIGTGATQTVNGSTLQPQRNV
VQTDLQQGTSFTLQLVQRTLEESLTSVQKSVHEDMRNLHIELLRQFHIQETEMSTILNGV
LEKLAELTKEVQSLRKENQQLRQLL
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgaatctcatggatctgtcaacaacctttttggctgcttgcggaggagacactgtcaaa
gtatttgacatttcgaagcagcccaatgatccctgcaccttaacctattctccgtcacct
ggatctcaagtgaactctgtgaaatggaatcatactaattttgttgttgccagtgctggg
gatgacaaaaaaatttcactctggcgcaaaaatggacagagtatgggaacgctacccgct
tcggaaagtgaagctggagataacattgatgaatccatattggccattagctttagcaac
aaaggttctaggtacctttgttcaggtgggagtggccaggttgtaagaatatgggatttg
cagaggaagcgctgcatcaaatggttgcgagggcacactgaaaccatcactggcgtaatg
tacaactgcaaagatgagcatttggcttccatcagtctaaagggagatcttattctccac
aaccttgcatctggggtcagggctgctgaactcaaggatccagatgagcaggtgctgaga
gttctcgactattcacgaattagccggcatgttttggtgacagctggtgatgatggttct
gtacatctatgggacacaactggcagaaatcccaagatttcttgggcaaagcaacattct
gctccaacaactggtgtttgcttctctccatcaaatgacaaggttattgcaagtgtgggt
ctggataaaaaattagttatatttgattcaggtactagaagaccgacatcatctgtttct
tacgaggctccattctcttcaatagctattagagatgatggttggacattggctgctggc
acaaatactggccgggtagtcttttatgatgttcgtggaaagccacagcctaccactgtt
cttcgtgcttttagtagttcagaggctgtcaccagcttatgctggcaaagatcaaagccg
ataatcatcactcagagtaattgcactcctgaaactgtccttttggggggctctggagag
gactctgtcctaatgccagatcaacttccatcaacaacatcaacgagcctctcatcagca
acagttggtactggttctcgtggttctggtcgcttagtttctttatctgatacgtcgatc
ttgacaacaacaaacagtggggtcttatcatccacatcacatttatctacggaggaaact
ccacaacggaatcatctgtggaccggtgcagctttgggtaggttacaggctacacgtact
ggttttaacttcagtgatgatatggatgttttttctccgcttgtcgaagttcagccgatt
gcaccctcccttggccattggtgggatgataaagaagaagtcaaaaaggatagtggtgct
gtggataagaagtcgactgtgttaccttcatcttctagaagattcgcttttagtgaagat
gggaatacggatcattctatatctgattggaaatcctattcgatcaccagacaggttcag
gaggattctcagtctacttcctctcccctgagttccacgcctgttacatctctgaagagt
gaccaatctttttcaccaacaccacctgaagcttggggagccaatcctccagataaattt
ggtcagatccgatcacagtctaagccatctcgcttcatgcctgcgagctctcagacatca
tttagtcttgcatctggttctctattttctggcttgcaagagtcatctctgtccacaagc
cagactactatcagctcattattgaatacaagcctaaattccacaaacctccagagtaga
gatatctttaactatgagattgcgtctgggctttcagagtcatcttctgcttttagttct
atttctaccacatctttaggtagcaaaaacagcacaggatcagctaatcttgatctccca
ggttcacagcacttgtcacttcccagaagattttctacatatactgagcgaataagtact
gcttcttcattcagtgaagtaggccttggaaaagcttcaccaaaactgaaaaagacgggg
gcagaaactagggaagagcttatgaatagtgctttatcaaggttcgacacttcaactgca
attggaacgggggcgactcaaacagttaatggttcaaccttacaaccacaaaggaacgta
gttcagacagatttgcagcagggaacatcttttacacttcagctggtacaacgaactctt
gaagagagtctaacatctgttcagaagtcagtccatgaagacatgaggaatcttcatatt
gagctactcagacaatttcacatacaagagactgaaatgtctaccattctgaacggggtt
cttgaaaagctagctgagctaacgaaggaagtacaatctctgcgaaaagaaaaccaacag
ctgcgccagctgctttaa

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