KEGG   Aristolochia californica: 137942232
Entry
137942232         CDS       T10486                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
acak  Aristolochia californica
Pathway
acak03013  Nucleocytoplasmic transport
acak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137942232
  09122 Translation
   03013 Nucleocytoplasmic transport
    137942232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acak03019]
    137942232
   03041 Spliceosome [BR:acak03041]
    137942232
Messenger RNA biogenesis [BR:acak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137942232
Spliceosome [BR:acak03041]
 Complex C
  Other components
   EJC/TREX
    137942232
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137942232
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40 Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st eIF2A Beta-prop_DCAF12 Beta-prop_EML Beta-prop_EIPR1 DSE1_N Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_RFWD3 WD40_MABP1-WDR62_1st TRM82_WD Tricorn_2nd NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT80_2nd Beta-prop_WDR41 Beta-prop_ACSF4 PAC11 CFAP251_N WDR90_beta-prop_4th CNH WD_LRWD1 Me-amine-dh_H TP_0598_N Cytochrom_D1 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 137942232
NCBI-ProteinID: XP_068644039
LinkDB
Position
Unknown
AA seq 314 aa
MEDTTMPFKNLHSRDYQGHKKKVHSVAWNCTGMKVASGSVDQTARVWHIEPHGHGKVKDV
ELKGHTDSVDQLCWDPKHPDLIATASGDKTVHLWDARSGKCSQQVELSGENINITYKPDG
THIAVGNRDDELTILDVRKFKAIHRRKFTYEVNEIAWNTTGAVFFLTTGNGTLEVLDYPS
LQAMHTLTAHTAGCYCIAIDPTGKHFAVGSADSLVSLWDFSEMLCVRTFTKLEWPVRTVS
FNYSGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQ
VDEGVFRIFGFESS
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggatacaacaatgcccttcaaaaatcttcacagcagagactatcaaggtcataag
aagaaggtgcattccgtagcatggaactgcacgggcatgaaggtagcttcaggttctgtt
gatcaaaccgctcgagtttggcatattgagccgcatggtcatggtaaggtgaaggatgtt
gagttgaaagggcacacagatagtgttgatcaactatgttgggatccaaagcaccccgat
ctgattgcaacagcctcaggggacaagactgtgcacctttgggatgctcgtagtggaaaa
tgctctcaacaggtggaacttagtggtgaaaacatcaacattacatacaaacctgatggg
acacacatagctgttgggaacagggatgatgaactaactatattggatgttcgaaaattt
aaagcaatccacaggcgcaagttcacctatgaggtaaatgagattgcttggaacactaca
ggggctgttttctttcttacgactgggaatggcactcttgaggttttggactatccatct
cttcaagccatgcacacacttacagcccatacagccggctgctattgcatcgcaatcgac
cctactggaaaacactttgctgttgggagtgctgattcattagtcagtctgtgggatttc
tctgagatgctttgtgtacgtacttttacaaaacttgaatggccggttagaactgttagt
ttcaattactctggtgattacattgcctcagctagtgaagatctatttattgacatttcc
aacgttcatactgggcgaactgtgcatcaaattccttgtcgagctgcaatgaatagtgtg
gagtggaatcccaaatacaatttgcttgcttatgcaggagatgataagaacaagtaccag
gttgatgaaggtgtgtttcgaatatttggctttgaaagttcttaa

DBGET integrated database retrieval system