Aristolochia californica: 137942996
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Entry
137942996 CDS
T10486
Name
(GenBank) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
acak Aristolochia californica
Pathway
acak03030
DNA replication
acak03420
Nucleotide excision repair
acak03430
Mismatch repair
acak03440
Homologous recombination
acak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137942996
03420 Nucleotide excision repair
137942996
03430 Mismatch repair
137942996
03440 Homologous recombination
137942996
03460 Fanconi anemia pathway
137942996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acak03000
]
137942996
03032 DNA replication proteins [BR:
acak03032
]
137942996
03400 DNA repair and recombination proteins [BR:
acak03400
]
137942996
Transcription factors [BR:
acak03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137942996
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137942996
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137942996
MMR (mismatch excision repair)
137942996
DSBR (double strand breaks repair)
HR (homologous recombination)
137942996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
137942996
NCBI-ProteinID:
XP_068644806
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MPVNLTSNAIPAVLKGDVNLKPLLQVLEIKLIRASQDRYKIILSDGVSTEQAMLATQLND
HVKSRKVQNGSVVQLIDYICSTIQNGKIIVVLNMETIIEYCEVIGNRKWAAQLESAPSRI
SSDSMSERNIGVPFGGTCDPAPSVRINSSVTSGPNNMTTSFRPTVQPSYQPPQSYKNRGP
IAKNEAPARIIPIEALNPYQGRWAIKARVTAKAELRRYNNAKGDGKVFSFDLLDSDGGEI
RVTCFNSAVDRFYSIVEVGKVYVISKGSLKPAKKNFNHLNNEWEILLDASSTMELFPDED
STIPRQQFSFKPINEIENVENNSIVDIIGIVVSVNPSMPILRKNGMETQRRILNLKDASS
RIVELCLWGEFCNKEGRELQEMLDSGFFPVLAVKAGKVNDFSGKSVGTISPTQLFVNPDF
PEAHNLRAWFDGGGKDIASQSFSKDIIPQGSWNEMRKTVSQIKTDGLGRSERPDWVTIKA
TIAFIKTDNFCYTACPLMVGDRKCSRKVSRLGKLRWRCERCDREFEECDYRYLLQAQVQD
HTGLTWVTAFQEAGEELLGCSAKELYGLTHEDKDDAMFGEIIRNSLFKQYLLQLKIKEEI
YGDEQKVKITVVKTEKVDFSAESVYLLNFLSKHIKIRHHFIPELVQTKVSPDLTNANDVI
AENPSDFPKSSSLFGFEIPCAEILICGDAKPLCSSGSEIDPKSSAEASAGQRDKVVTLSP
NFPSEIASPANASRYSVVSQYFTQASRHFCISSTAKPSAAISRTCLCIANHGPSWPIVFP
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtaaacctcacttctaatgcgatcccagctgttttgaaaggagatgtaaatttg
aagcctctactccaggttttggagataaagctgatccgggcatctcaggataggtataaa
attatcctctcagatggtgtctccacagagcaagcaatgctggccactcagcttaatgat
catgtgaagagtaggaaagtgcaaaatggatctgtagttcaactgattgattatatctgc
agcactatccaaaatggcaagattattgtggttctgaatatggaaactattattgaatac
tgtgaggttattgggaatcgaaaatgggctgcacaactagagtctgccccttcaaggatt
tcatctgacagcatgtcagaacgaaatattggagtaccttttggtggcacatgtgatcct
gctccttcagttagaatcaatagcagtgtaacatcaggtcccaataacatgacaacaagc
ttccgacccactgttcaaccatcgtaccagcctcctcaaagttacaaaaatcgtggccct
attgcaaagaatgaggctccagctcgaattatacctatagaagccttgaatccttatcag
gggcgttgggcaattaaggcaagagttactgcaaaagctgaacttcgacgttacaacaat
gccaaaggagatggcaaggtgttctcttttgatctccttgattctgatggaggagaaatt
cgggtcacttgcttcaattctgctgtagaccgtttttacagtattgttgaggttggtaaa
gtctatgtaatatcaaagggaagcttgaaacctgctaagaagaacttcaaccatcttaat
aatgagtgggaaatacttttggatgctagctcaactatggagctctttccggatgaagac
agcacaatacctaggcaacaattctctttcaaacctattaatgagattgaaaatgtggag
aacaattctatcgtggatattattggtattgtggtatcagttaatccttcaatgcctata
ctgagaaaaaatggtatggaaacacagaggagaatcctgaatctgaaggatgcctcgagt
cggattgtggagttatgtctatggggcgagttctgcaacaaggaaggccgagagctgcaa
gagatgctggattcaggatttttcccagttttagccgtaaaagctgggaaggtaaatgac
ttcagtggcaaatcagttggaactatttctcccactcagctttttgttaacccagatttt
cctgaggctcacaatcttagagcttggtttgatggagggggaaaagatatcgcttctcag
tctttctctaaggacattattccacaaggctcatggaatgaaatgcgcaaaactgtgtca
cagataaaaacggatggccttggtagatcagaaaggcctgactgggtcaccataaaggca
acaattgcttttattaagacagataatttctgctacacggcttgcccattgatggttgga
gatagaaaatgtagtcggaaggtgtcaagattgggaaagctcagatggagatgtgaacga
tgtgacagggagtttgaggaatgtgattaccggtatcttcttcaagcacaagtgcaggac
cacaccggactgacttgggttacagctttccaggaagcaggggaagagctcttgggttgc
tctgctaaggagttgtatggtttaacacatgaagacaaagatgatgccatgtttggggag
attattcgtaatagtctcttcaagcagtacttgttacagctgaaaattaaagaggagatt
tatggagatgagcaaaaagtaaaaatcactgttgttaagacagagaaagtggatttttca
gctgaaagtgtgtatcttctcaatttcttatccaaacacattaaaatcagacatcacttc
atcccagagttggtccaaaccaaggtctcccccgatctgaccaacgccaacgatgtcata
gccgaaaacccctctgattttcccaaatcgtcgtcgttgttcggctttgaaattccgtgt
gctgaaatcttaatttgtggtgatgcaaagcctctctgctcctccggatctgagattgac
cccaaatcctccgcagaggcttcggctggtcaacgggacaaagtggttactttgtcaccc
aatttcccgtcggagatagcttctccagcgaatgcctctcgatactccgttgttagccaa
tacttcacccaggcatcacgccatttctgtatctcttccactgcaaaaccatctgcagcc
atttcacggacttgtctgtgcatcgccaaccatgggccctcgtggcccatcgtgttcccg
ctctaa
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integrated database retrieval system
