Aristolochia californica: 137943958
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Entry
137943958 CDS
T10486
Name
(GenBank) uncharacterized protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
acak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137943958
03460 Fanconi anemia pathway
137943958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acak03400
]
137943958
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137943958
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
137943958
FA (Fanconi anemia) pathway
Downstream FA components
137943958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
137943958
NCBI-ProteinID:
XP_068645510
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MKSVFEQASPPMASPAPENNPNVYTIGGIPVEFPYKPYGTQLAFMGRVIATLDKAQRQGR
CHALLESPTGTGKSLSLLCSTLAWQKHFSLKPLVPNTNGQSVGPDASLDPLAFGGGFIPE
PDSMDNSLLGSSRCSSQATNNKKEKKPTVPRIYYSTRTHGQISQVIREYRKTSYHGPMSV
LASRKHYCTNRHVCGKEKIDEECKNLLTDENMGCPEFKNVHRIRSHPSFQKGGYNEVHDI
EDLVKIGHAVRGCSYFAARSMAEEAPLVFCPYNYIINPTIRKAMEVDLQGAIVILDEAHN
VEDIARDAGSLDVEEELLDELQSELGQLCLIESQIMVYQPLYDMIQGIISWIGQKKNNLE
RREFEHYFSCWTGNEALAELHEAGVTRECFPILQECAVKAIKAASDTDLDGVHLSGRSAV
LLEGLFSSLSYFFSENGAHACDYRLALQKYMKRDASCATQKLTVSLNLWLLNPAVVFKEI
AGLSLSIILTSGTLSPVDSFASELGVQFETCMEAPHVIDVESQLWAAVISSGPGNYRLNA
SYKTADGFDFQDTLGASLEEICKIVPGGALVFFPSYKLLEKLQSRWIQTGQWSRLNAQKS
LFVEPRGNHEDFESVLKCYYNSIHGNTRSVCRETAKSKPKKSDKQDMEQLSTKDHSPKHT
QKAAAFLAVCRGKVSEGIDFSDDNARVVVVVGIPFPNINDIQVVLKKKYNDKYKMTRNLL
SGSQWYCYQAFRALNQAIGRCIRHRLDYGAIILLDERFKEENTAYISKWLRKSIKRYDNF
DMSMEGLRKFFKAKEHLSQNDPKVGVIIKMEDSHIDREPLNKKGHCNKTSRTCGRKRNKC
NVNGDEEVKITYESNIAAVKSRKLAQFLVAVKKDRTSVEDNAQNSSIGAEEKNIGECSQR
VDLNCSAQIDTRSLETASAAYFESSSDESIVKESSRFLSMNEATSTVVEGCNELSAQQCC
PSLSHANLSGLSERSCSLATPEREANFSVCSSELEPSFARSVNSHSSKRRLPISFQMCIH
SQTDPSTFSETNCSNQDVNFQIGLDPEICHMRSRVPRPDMPKNASNDLIYLDMDKKLHLS
CFSCNNPLGLPENNFFIMCSLGLSSKDYLVSVYKNGSVGAHLQNLLFVSEPLNVSVVIAD
ISFVNNAFTARTGNGPLPGVWCEEDGCVFRTFPCCFCTKSGCDLGMQVLATDASNTHLMN
KVILYVDRVLIKDHEDESKEKPLVAASGSNSTQVLYSKSFQKDSCSKQPNNLFSCGSTKS
KLRLPKRLSTTGRCITEQKCGTSDTLQ
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgtcttcgagcaagcttctcctccaatggcttctccagcgcctgagaataac
ccgaatgtgtacacgatcggcgggatccctgtcgagttcccctacaaaccgtacgggact
cagctggctttcatgggaagagttatcgcaactttagataaggcccaaagacaaggccgc
tgccacgctctccttgaatcccccaccgggacggggaagtccctttcccttctctgctcc
accctagcttggcagaaacattttagtttgaagcctctagtacccaatactaacgggcag
agtgttggaccagatgcttctctcgatcctcttgcattcggcggcgggttcatacctgaa
ccagactcaatggataattctttattgggaagttctagatgttcttcacaagcaacaaac
aataaaaaagaaaaaaagcctactgtgcctcgcatatattattccacaaggacacatggg
caaataagtcaagttattcgtgaataccgtaagacatcatatcatgggccaatgtctgtt
ctggcgtcccggaaacactactgcaccaacagacatgtttgtgggaaagagaaaattgat
gaggagtgtaaaaatctgttaacagatgaaaatatgggatgccctgaattcaaaaatgtt
catagaatcagatcccatccctcctttcagaaaggaggctacaatgaggtacatgacatt
gaagatcttgtgaaaattgggcacgctgtcagaggctgttcatattttgctgcacgttca
atggctgaagaagcaccactagtcttttgcccttacaactatatcataaatccaaccatt
cgaaaggctatggaggttgatctgcaaggggctattgtaattcttgatgaagcccacaat
gtggaggacatagcacgtgatgctgggagtttagatgttgaagaagaattactagatgaa
ttgcagtctgagttaggccaactatgcctaattgaaagtcaaatcatggtttatcagcca
ctatatgatatgattcagggaatcataagctggattggccaaaagaaaaacaatttagaa
agacgtgaatttgagcattacttctcatgttggactggtaatgaagctttggctgagctt
catgaagctggtgtcactcgggaatgctttccaatcttgcaagaatgtgctgtaaaggct
atcaaagctgcttcagacacagatttggacggagttcatttgagtggcagatcagcagta
ctcctggagggattattctcttcattgagttactttttctctgaaaatggtgctcatgca
tgtgactatcgactggctctgcagaaatatatgaagcgagatgcaagttgtgctactcag
aaattgactgtgtcattgaatctgtggttgctgaatcccgctgtagttttcaaggagatt
gctggtctttctctctccataattctcacttctggaacactctcccctgtggactcattt
gcatcagagttaggtgttcaatttgaaacatgcatggaagctccacatgtgatagatgtg
gaatcacagctatgggcagcggtgatctcaagtggtccaggaaattatcgacttaatgct
agttataaaacagctgatggatttgatttccaggacacacttggggcttccttggaggag
atctgcaaaattgtgcctggtggcgcccttgttttcttccctagctataaattgcttgaa
aagctacaaagtcgctggattcagacaggccaatggtctcgactaaatgcacaaaaatcc
ctttttgtggaaccaagaggaaatcatgaagattttgagtctgtattgaaatgttattac
aattcaattcatgggaacacaagaagtgtttgtcgagaaactgctaagtctaaacctaag
aagagtgacaaacaggacatggagcagcttagtacgaaagaccattcaccaaaacatacg
cagaaagctgctgcttttcttgcagtttgccgtggaaaggtatcagagggtattgacttc
tctgacgacaatgctcgtgtggttgtagttgttggaatcccttttccaaatataaatgat
attcaagtggtgttgaagaaaaagtataacgataagtataagatgaccagaaatcttctt
agtgggagccagtggtactgctaccaagccttccgtgctctaaatcaggctatcgggcgc
tgtattaggcatcggcttgactatggggctatcattctattagatgagcggtttaaggag
gagaatacagcatacatttcaaaatggctgaggaaatcaattaaacgctatgacaacttt
gacatgtcaatggaaggattaaggaaatttttcaaagcaaaggagcacttgagccaaaat
gaccccaaagtcggggtcataattaagatggaagactctcatatagacagagagcctctg
aataaaaaaggccattgcaacaagacttcaagaacgtgtggtaggaagaggaacaaatgt
aatgttaatggtgatgaggaagttaaaataacttatgaaagtaatattgcagctgtgaag
agtagaaaattggcccagtttctggtggcagtgaaaaaagataggacttcagtcgaagat
aatgctcaaaactcatcaattggagcagaagagaaaaacattggcgagtgcagtcaacgt
gttgatctaaattgcagcgcccaaatagacaccaggagtttggaaacagcttcggcagca
tattttgaaagcagttcagatgaaagcatagtcaaagaaagttccagatttctctccatg
aatgaagcaacttccactgtagttgagggctgcaatgagctatcagcccaacagtgctgt
ccttcactttctcatgcaaatttaagtggactctctgaaaggtcatgctctcttgctaca
cctgaaagggaagcaaatttcagtgtctgtagttcagaattagaaccatctttcgccaga
agtgtcaattctcacagtagcaaaaggagactgcctatcagtttccagatgtgtattcac
tctcaaacagatccatccactttctcagaaacaaactgttccaaccaggatgtcaatttt
cagataggattggatcctgagatttgtcacatgcgatccagagttccaaggccagatatg
ccgaaaaacgcttcaaatgatttgatttatttggatatggacaagaaactgcatctaagc
tgtttctcctgtaacaatccattagggctgcctgagaataatttttttatcatgtgttca
ttaggtttatcttcaaaagattatttggtatccgtttacaaaaatggttcagtgggtgcc
catttgcaaaatctcttgtttgtgagtgaacccttgaatgtatctgttgtaattgctgat
atttcatttgtaaataatgccttcactgcacgaactggaaacggtccactgcccggagtt
tggtgtgaagaagatggctgtgttttcaggacttttccctgctgcttctgcacaaaatct
ggctgtgatcttggtatgcaagtcttggctacagatgcttcaaatactcatttaatgaat
aaggtcatcctttatgttgatcgtgtgttgatcaaggaccatgaagacgagtcaaaggaa
aagccccttgttgctgccagtggatcaaattctactcaagttttatattcaaaatccttt
cagaaagattcgtgttctaaacaacctaacaatctcttcagctgtggttcaacaaaatca
aagctgagactacccaagagactttcaactactgggaggtgcataactgagcaaaaatgc
ggaacatctgatactttgcaatag
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integrated database retrieval system