Aristolochia californica: 137943968
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Entry
137943968 CDS
T10486
Name
(GenBank) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137943968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137943968
Spliceosome [BR:
acak03041
]
Complex A
Other components
Complex A specific factors
137943968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
RRM_5
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_Nup35
RRM_10
zf-CCHC_2
RRM_7
RapA_C
Motif
Other DBs
NCBI-GeneID:
137943968
NCBI-ProteinID:
XP_068645527
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MEDSSISSAKTVAFPSENPHSYYHSFQSADSSSENTLHPGNHNLAFQAGVPGFHPQISIV
SSETLAPTPSDPRNFAEQAPQPPLSGAIDSAIQNPPPPNSETPSSGPQPPSEVKPGSGKP
FLAEDGVNLTNSGTDRDISGGEEETSSKRRRRSRWDPPSESDNADAAGGGTRKRKSRWAD
DEPKPVIQLPDFMKELTGGNLDPEVQALNIRLLEINRMLQSGLPLDDRPEGARSPSPEPI
YDNMGIRVNTREYRAREKLTRERQEIISQLIKRNPAFKPPADYRPPKLHKKLYIPMKEYP
GYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGRLQQKRDLKPDPSENEDLHVLV
EADTQEALDAAAGMVEKLLMPVDEGLNEHKRQQLRELAALNGTIRDDEICRLCGESGHRQ
YACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTGKKMDDEYQNFLAELGGTAPESLTRQ
NSLLPILGSAGSGSNPPWASGNSGTSQVASGAVAKTVKEYDETNLYIGYLPPNFDDDALI
RLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVSQANQAIASMNGYRLEGRVIAVRVAG
KPPQPTVPSGPPAPAVSTYSSLEQVAGAYPSQQYTDGPYGNTPPVNYMGAPVPWGPPVPP
HYPPYTPPPPGSSVYTPVQGQTMPPYGSQYPHPVPTVPSVAPSQTVPSSEALQNLPPGVQ
SQTNPPAHSVPGNFYGSSVVGMASTIQSPYPPSSLGYSAYYHVPPAPSHSVVDQSQSVAN
MPWAPNRPAAPQAVSSSETTHAADSEYEKFMSEMK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcttctatatcgtctgccaaaaccgtggcttttccctctgaaaatcctcac
tcctactatcacagttttcaatccgctgattcttcatctgaaaataccctacatcctggg
aaccataaccttgcttttcaagctggggttcctggttttcatcctcagattagcatcgtt
tcctctgaaaccctagctccgactccgtcagacccccgaaatttcgctgaacaagcacct
cagccacctctttctggtgcaattgattcggctattcaaaatccccctcctcctaacagt
gaaactccttcatccggaccccaacctccatccgaggtcaagcctggcagtgggaagcct
tttctcgctgaagatggcgtaaacctcaccaacagcgggactgatagggacatctccggc
ggagaggaagagacatccagtaagcgtcgcaggcgcagccgctgggacccgccatctgag
tccgataatgctgatgctgcaggtgggggaacacgcaaacgaaagtctcgttgggcagat
gatgagcccaaacctgtgattcaattaccagacttcatgaaagaactgacaggaggtaat
cttgaccctgaagtacaagctctaaatatccgactcctggaaatcaacagaatgttacag
tcaggccttccattggatgaccgccctgaaggggctcgatccccatcacccgaacccata
tatgacaacatgggcatccgggtaaacaccagagagtacagggctcgtgaaaaacttaca
cgggagaggcaagaaattatatcgcagcttattaaacgtaatcctgcatttaaacctcct
gctgattaccgccctccaaagctacataaaaagctttacattccaatgaaagaataccca
gggtacaattttataggacttattattggtccgaggggaaatacacaaaaaaggatggag
aaggagacaggggcaaagattgttattaggggcaaaggttcaataaaagaaggtaggcta
cagcagaaacgtgatttaaaacctgacccttcagaaaatgaggacttgcatgttttagta
gaagcagatactcaggaagcattagatgctgctgcaggaatggtggagaagttgttaatg
cctgtagatgaagggcttaatgagcataaaaggcagcaacttcgagaactggctgcttta
aatgggaccattcgagatgatgagatttgccgattatgtggtgaatctggtcaccgccaa
tatgcttgtccaagccgcacaagcacttttaagagtgatgttttatgtaaaatttgtggt
gatgggggccatcctactattgactgtcccatgaaaggtactgggaaaaagatggatgat
gagtatcagaatttcttggctgaactaggtggaacagcacctgagtctctgactcgccag
aactctttgttgccaattcttggttcagctggttcaggaagtaacccgccttgggccagt
ggtaactctggaacatcacaagttgcatctggagctgtggccaaaacagtaaaggagtat
gacgagacaaatctctatattggctatctgcctcctaatttcgatgatgatgctttgata
cgactgttttcatcatttggcgaaattgtaatggctaaagttatcaaggatcgggtaact
ggattaagtaagggctatggttttgtaaagtatgcagatgtttcacaagccaatcaagca
atagccagtatgaatgggtatcgtctggaagggagagtcatagctgtaagagttgccgga
aaacctcctcaacctactgtaccatctgggcctcctgctccagcagtttctacttattcc
tctttggagcaagtggctggtgcatacccgtctcagcagtatacagatggaccgtatgga
aacacgcctcctgtgaactacatgggtgctccagtaccatggggtccacctgtcccacct
cattatcctccatacaccccacctcctcctgggtcgagtgtatatactccagttcaagga
caaacaatgcccccctatggctctcaatatccacaccctgtgcctacagttccctcagtt
gcaccttctcaaactgtgccttccagtgaggctctacagaatctgccacctggggtgcaa
tctcagaccaatccccctgcacattcagttccgggcaatttctatggaagttctgtagtt
ggaatggcctctaccattcaatcgccatatccaccatcatcattaggttactcagcttat
tatcatgtacctcctgctccatctcattctgtagtggaccagtctcagagtgtggcaaat
atgccatgggccccaaatcgacctgcagcaccacaggctgtctcatcttcagaaacaaca
catgctgctgactcagagtacgagaaattcatgtctgagatgaagtga
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