KEGG   Aristolochia californica: 137944084
Entry
137944084         CDS       T10486                                 
Name
(GenBank) histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
acak  Aristolochia californica
Pathway
acak03082  ATP-dependent chromatin remodeling
acak03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137944084
   03083 Polycomb repressive complex
    137944084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acak03036]
    137944084
Enzymes [BR:acak01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     137944084
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     137944084
   HDAC complexes
    Sin3A-HDAC complex
     137944084
    BRAF-HDAC complex
     137944084
    REST complex
     137944084
    SHIP complex
     137944084
    MiDAC complex
     137944084
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     137944084
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137944084
  Chromatin remodeling factors
   NuRD complex
    137944084
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 137944084
NCBI-ProteinID: XP_068645702
LinkDB
Position
Unknown
AA seq 439 aa
MDSGGNSLPSGPDGVKRKVCYFYDPEVGNYYYGQGRPMKPHRIRMTHALLAQYGLLQQMQ
VLKPFPARDRDLCRFHADDYVAFLRSITPDMTKDQMKALKRFNIGDECPVFDGLYSFCQT
YAGGSVGGAVKLNHGCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV
DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHGKGKYYSLNVPLDDGID
DESYQSLFKPIIRKVMEVFRPGAVVLQCGADSLSGDLLGCFNLSITGHAECVRYMRSFNV
PLLLVGGGGYTIRNVARCWCYETGVALGVELDDNLPHHEYYEYFGPDYTLHFAPSNMENK
NSRQLLDDIRAKLLDNLSKLRHAPSVHFQERPPETELPEADEDQEDPDERWDAESDMEVD
NPKLLDEASRKISRDRLST
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggattcagggggcaattctctaccttctgggcctgatggggttaagaggaaagtttgt
tatttctatgatcctgaggtgggaaattattattatgggcaaggtcgccctatgaagcct
catcgcattcgcatgacccatgcccttcttgcacaatatggattactgcaacaaatgcaa
gttcttaagccctttcctgcgagagatagagacctctgccgattccatgctgatgattat
gtggccttcttaaggagcattactcctgatatgacgaaggaccagatgaaagcactgaag
aggtttaacattggagatgaatgccctgtatttgatgggctctactctttctgtcagaca
tatgctggtggatcagtaggtggcgctgtgaaattgaatcatggttgtgatattgctatc
aattgggccggtggtcttcatcatgctaaaaagtgtgaggcttcgggcttctgttatgtt
aatgatatcgtcttggcgatattggaacttctcaaacagcatgagagggttctatatgta
gacattgacgtacaccatggagatggagtagaagaagctttttacacgaccgacagggta
atgactgtctcgttccataagtttggagactattttcctggtacaggtgatattcgtgac
attgggcatgggaaagggaaatattactctttgaatgtccctctagatgatggtatagat
gacgagagttaccagtctttgttcaaacctatcattagaaaagtgatggaagtgttccgg
ccaggagctgttgtccttcaatgtggggcagactctttgtctggagatctgttgggttgt
ttcaatctctccattacaggtcatgctgagtgtgtaagatatatgaggtcattcaatgtg
ccactgctgctggttggaggtgggggttatactataaggaatgttgcaagatgctggtgc
tatgagacaggagttgcactgggtgtggaattggatgataatctaccgcatcatgagtat
tatgaatattttggtccagactatactcttcattttgctcccagtaacatggaaaataaa
aattctcgtcaattattagatgatatccgagcaaaattgcttgacaatctttcgaagctt
cgacatgcacctagtgtccattttcaggaaagaccacctgaaactgaacttccagaggca
gatgaagatcaagaagatcctgatgagagatgggatgctgagtctgacatggaagttgac
aatcctaagctgttagatgaggcttcacggaagatctcaagggataggctgagcacatga

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