Aristolochia californica: 137944148
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Entry
137944148 CDS
T10486
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
acak Aristolochia californica
Pathway
acak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137944148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137944148
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
137944148
Prokaryotic type
Archaeal type
TFB
137944148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_3
WHD_GDS1
RB_B
TPR_NPHP3
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
137944148
NCBI-ProteinID:
XP_068645798
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MADAYCPDCKKSTEVAFDHSAGDTVCTECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVISKPNGTQGEFLSSSLGRWQNRGSNPDRSLILAFRNIATMSDRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLELEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEEL
DIRRSPISIAAAIIYIITQLSDDKKLLRDISLATGVAEGTIRNSYKDLYPYASRLIPSSF
AKEEDLRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcatactgcccagattgcaagaagagcaccgaagtggcttttgaccactca
gcaggagacacagtgtgcactgagtgtggtttggtcctggaggctcactctattgatgag
acttctgagtggagaacctttgcaaacgagtcaggtgacaatgatcctgttcgtgttggt
gggccatccaatcctcttttaactgatggaggtctttccactgtcatctctaaaccaaat
gggacccagggcgagtttctttcttcctctcttggccgttggcaaaatcgtggttccaat
cctgaccgctcccttatacttgcatttcgcaacatagccaccatgtctgataggttgggc
cttgtggctactataaaggaccgggcaaatgagatatacaagaaggtggaagatctaaag
tctatccgaggtagaaatcaagatgctattttggctgcttgcctgtacattgcttgtcga
caagaggacaaacctcgcactgtaaaggagatttgttctgttgccaatggagctaccaaa
aaggaaattggccgggcaaaagagtacatagtgaaacaactggagcttgaaatgggtcaa
tccatggagatgggaacaatacatgctggtgatttcctgagaagattttgttctcatctt
ggaatgactaatcaagcagtcaaagctgctcaagaggcagttcagaagtcagaagagctt
gatataaggaggagcccaatatcaatagctgcagcaattatttacatcattacccagttg
tccgatgacaagaaacttcttagagatatttcactggctactggtgtggcagaaggaaca
attaggaattcctacaaggatctctacccttacgcctcaaggctaataccaagttctttt
gctaaggaggaagatctcagaaatctttgcagtccttga
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