Aristolochia californica: 137944856
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Entry
137944856 CDS
T10486
Name
(GenBank) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
acak Aristolochia californica
Pathway
acak03030
DNA replication
acak03420
Nucleotide excision repair
acak03430
Mismatch repair
acak03440
Homologous recombination
acak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137944856
03420 Nucleotide excision repair
137944856
03430 Mismatch repair
137944856
03440 Homologous recombination
137944856
03460 Fanconi anemia pathway
137944856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acak03000
]
137944856
03032 DNA replication proteins [BR:
acak03032
]
137944856
03400 DNA repair and recombination proteins [BR:
acak03400
]
137944856
Transcription factors [BR:
acak03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137944856
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137944856
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137944856
MMR (mismatch excision repair)
137944856
DSBR (double strand breaks repair)
HR (homologous recombination)
137944856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
zf-CCHC_2
CDC24_OB3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
137944856
NCBI-ProteinID:
XP_068646730
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MAIRLTEDSIRRISEGELDVTPVLQVVDLRLVNTVHNTNERYRMVLSDGVSLQQAMLATQ
MNAVVKGGGLKKGSIIQLIEYICNVIQNRKIIIIMKLEVLVEECDFIGDPKPYAEGAPRS
VPAASPGRPPLPAQPSSMDQSGRATGNQQSYSGPPVGGLSSGHHMVGGPPPTANVLPHGG
SFAGPTSRRNMTNEAPPYFKAESGVGSPLSGNLPQNKGNYNPNLRNPGPAGGSRLPSNTY
GQPAQSVYHQPSPMYSNRGPIAKNDAPARIIPIAALNPYQGRWTIRARVTAKGELRRYNN
PRGEGKVFSFDLLDSDQGEIRVTCFNAVAEQFYDQIEVGKVYLVSKGSLKPAQKNFNHLN
NEWEIFLESTSTIQPCIEEDHTIPRQNFNFRPIGDIESMETNSMVDVIGVVSSINPSSSI
MRKNGTETLKRSLQLKDMSGRSVELTLWGNFCNAEGQELQTMCDSGNFPVLAVKAGRVND
FNGKSVGTISSSQLYINPDFQEARMLKEWFDKEGKHTASHSISRDSSGMGRVDIRKTVSQ
IKDEGLGRSEKPDWISVKASVSFAKTDKFCYEACPLQVGDRQCNKKVTNNGDGKWQCERC
DQSFPQCDYRYLLQLQIQDHTGLTWVTAFQESGEEIMGISAKDLYLLKYEEQDDAKFGEI
VRRVLFSQFLFKLKVKEEAFNDEQRVKITVVKAEKVNFLQESLYLLSLIEKSPMEDSVDI
VGKGTPAASYSGMTNTGYSSIGMKQGQQHMGNTSGSVANCDRYAVASAKHVGQAGNPYSG
VAGSGFGGARMSVQCGNCGSGNHNSQNCPHLMSGQGLHPVGGSYSCKPSYSNTVADGGGG
GKCFKCNQSGHWARDCPGNTGVQSGYGSSIGGARYQAPKMEF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggctattaggttgacggaagattctattcgaaggatctccgagggggagttggacgtc
acgccggttcttcaggttgtggatctcaggttggtgaatacggttcacaacacgaacgag
cgataccgcatggtgctgtccgatggggtgagtctccagcaagcgatgcttgcgactcag
atgaatgcggtcgttaagggcggtgggttgaagaaggggtcgattattcagttgatagag
tacatttgcaatgtgatccagaatcgcaagattattattattatgaagttggaggtattg
gttgaagagtgtgattttattggggatcctaaaccctatgcggagggtgctcctcgtagt
gtgcctgctgcttcaccaggaagaccccctttgcctgcacagccatcttccatggatcag
tctgggcgggcaactggcaatcaacaatcttacagtggtccaccagttggtggcttgagt
tcgggacaccacatggttggaggacctccccctactgcgaatgtgctacctcatggtggt
tcttttgctggtcccacctccagacgaaacatgactaatgaagcccctccctatttcaaa
gcagaatctggtgttggctctccactctctggtaacctgcctcaaaacaagggaaactat
aatccaaatcttcgtaatcctggacctgcaggaggatcacggcttccttctaatacttat
ggacaacctgctcagtcagtctatcaccaaccttctccaatgtactcaaatagaggacct
atagcaaaaaatgatgcccctgccaggataattcctattgctgctctgaacccatatcag
ggtaggtggacaatcagggcacgggtgacagctaaaggagaacttaggcgctacaataat
ccaaggggagaggggaaggtgttctcatttgatcttctagactctgatcaaggagaaatt
cgtgtgacctgctttaatgcagtggctgagcagttctatgatcagattgaggtggggaaa
gtgtatttggtctccaagggaagcctcaaaccagcgcagaaaaatttcaaccacctcaac
aatgagtgggagatttttcttgagtcgacttccactattcagccttgtatagaagaggac
cacacaataccaagacaaaatttcaatttccgcccaataggggacattgagagcatggag
actaattccatggtggatgtcatcggtgtagtttcttccatcaacccatcaagttccata
atgaggaaaaatggtactgaaactctcaaaagatctttgcagttgaaggatatgtctggt
cggagtgttgagttaactctatggggaaatttctgtaatgcagaaggccaggagctgcaa
actatgtgtgattctggaaattttcctgttctggctgtgaaggctggtagagttaatgat
tttaatgggaagtcagtgggcacaatttcttccagtcaattatatataaatcctgatttc
caagaggcacggatgttaaaggagtggtttgataaagaaggaaaacacactgcttctcac
tctatttccagggattcttctggtatgggaagggttgatattcgtaaaactgtgtcccaa
atcaaggatgaggggcttggaagatctgaaaagcctgattggatatctgtgaaggcatct
gtttcatttgcaaagacggacaaattttgctatgaggcatgccccttacaggttggagat
agacaatgcaacaagaaggttacaaacaatggtgatgggaagtggcaatgtgaaaggtgt
gatcaatcttttccccaatgtgactataggtacctgcttcagcttcaaattcaggatcac
acaggcttaacatgggtgactgcttttcaggaaagtggtgaagagattatgggaatatct
gctaaggacttgtatttgttaaaatacgaagaacaagatgatgcaaaatttggggaaatc
gtaaggagagtcctttttagtcagttcttattcaagctgaaagtgaaggaggaggctttc
aatgatgagcagcgtgtgaagataactgttgtgaaagcagagaaagtaaacttcttgcaa
gagagcttgtatttgttgagtttgattgaaaaatcaccaatggaagattcagttgacatt
gttgggaagggaacaccggcagcttcatactctggaatgactaatactggatatagcagc
attggcatgaaacagggccagcagcatatgggaaatacttcaggaagtgtagctaactgt
gatagatatgcagtggcatcagcaaaacatgtgggacaggcaggaaatccatatagtggt
gttgccggttcaggttttgggggtgccagaatgtctgtgcaatgtggcaactgtggctct
gggaaccacaactcacaaaattgtccccatcttatgagtgggcaggggctgcatccagtg
ggtggaagctatagctgtaagccctcttacagtaacactgtcgcagatggtggtggtggt
ggtaaatgtttcaaatgtaatcaaagtgggcattgggctcgagactgccctggtaacact
ggggtccagtcgggttatggaagcagcatcggtggtgctagatatcaagctccaaaaatg
gaattttag
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integrated database retrieval system
