Aristolochia californica: 137945322
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Entry
137945322 CDS
T10486
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137945322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137945322
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137945322
Spliceosome [BR:
acak03041
]
Complex A
U2 snRNP components
U2 related factors
137945322
Complex B
137945322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
137945322
NCBI-ProteinID:
XP_068647266
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MEDGKHKCRREDGEKKEDSNRSDRDRDRDAERKEDSRRGERERERDRDIERKEESKRGDR
DRDRGKVRERNGERHKEREKTRDRDAEKKDRESRRSERETSVDDKHRDKYRESRYKDGER
DRDKEREERDKEKERQERSRNRQEERDKVKEKVKDKEKEREKERDREGDDREREKERERE
RERGEKEREREREDRAREREREKDKERAREREKDRAKEREKRREVDRDDDRDAEDGRENE
RKRRRKVDDSKARDREQERERNRSELNREEKEDNRRKKNEEDMVAKEKGKKEEDMEDEQR
KLDEEIDKRRRRVQEWQELRRKTEEHEREKLGQVSTEESGKIWSLESDDEEPVPVAKADK
GVDQNGDTNHSSEDGDPMAIDSENGSSAPIIDSHDGNANGEEEIDSLDAFMNSMVLPEVG
KLDKADISSLVGAKQPDSGKNDLKDGQSNGKQKRKGTRKAMGRIMPDEDSDSDADDFDND
EAPLEDEDDDEFIKRVKKTKAEKLSIVDHSKIQYLPFRKNFYIEVKEISRMSAEDVAAYR
KQLELKIHGKDVPKPVKSWSQTGLTSKLLDTIKKLNYEKPMPIQDQALPIIMSGRDCIGI
AKTGSGKTLAFVLPMLRHIKDQPPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGIN
CVPVYGGSGVAQQISDLKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYFVMDEADRMF
DMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNSDITQ
LVEVRQESERFLRLLELLGEWYEKGKILIFVHSQEKCDSLFKDLLKRGYPCLSLHGAKDQ
TDRESTIADFKSNVCNLLIATSIAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGR
KGCAITFISEEDARYAPDLVKALELSEQAVPDDLKALADGFMAKVKQGTERAHGTGYGGS
GFKFNEEEDEARRAAKKAQAREYGFEEDKSDSESEDEGVRKAGGDLSQAAAIAQAAALAA
VTKVAVTTMPTPVPAVQLLANGVLPSVGLPGVAALPGTSLPVASLTNDGVARAAALAAAM
NLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKVTHKDTLVPISDWTGAAITTRGQYFP
PGKIAGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALALPGSGQPDQASTGTCF
SAAFFGGDGGQFDGWHGPTGTTLKSIPSHFGFIPVTLKPAQIFSCLRIHHYLKLSHYFLG
FVIPSCPEARFCFRPCLATFVFVFL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggaaaacacaaatgcaggagagaggatggggagaagaaggaggattccaat
agaagtgatcgggatcgcgatcgtgatgcagagaggaaggaggactcgagaagaggagaa
cgggagcgtgagcgtgaccgcgatatagagaggaaggaagaatcaaagagaggtgatcga
gatcgtgaccgtggaaaagttagggagaggaacggcgagcggcataaggagagggagaag
accagggatagggatgcggagaagaaggatagagagagtcggcggtcagagagagagacg
agcgtcgatgataagcacagagacaagtatagagaatctaggtataaggatggggaaagg
gatagggataaggagcgggaggagagggacaaggagaaagagaggcaggagaggtctcgt
aaccgtcaagaggagagggataaggtgaaggagaaggtgaaagacaaagagaaagagagg
gaaaaggagagggatcgggagggagatgatagagagagggaaaaggagagggaaagagaa
agggagagaggggagaaggaaagagaaagggagagagaggatagagctagggaaagggag
agagagaaagacaaagaaagggctagagagagggagaaggatcgggccaaagaacgggaa
aaacgtcgggaagtagacagagatgatgatagggatgctgaagatggaagagaaaatgag
aggaaaaggcggaggaaggttgatgattctaaagcaagagacagagaacaggaacgggag
cgaaataggtcggagctgaacagagaagaaaaggaagataatagaagaaagaaaaatgaa
gaggatatggttgccaaagagaaggggaaaaaagaagaggatatggaggatgagcaacgg
aaactggatgaagaaatagataagaggagacggagggtgcaagagtggcaggagttaagg
aggaagacggaagaacatgagagggaaaaactagggcaagtaagcactgaagaatctggg
aaaatctggagcttagagtctgatgatgaagaacctgtcccagtggcaaaggcagataaa
ggtgttgatcaaaatggtgacaccaaccattctagtgaagatggtgatcccatggcaata
gattctgaaaatgggtcctcagcacccattatagacagtcatgatggcaatgccaatgga
gaggaggaaattgattcactggatgctttcatgaattctatggtgctaccagaagttgga
aaactggataaagctgatatttcctctttggttggtgctaaacaaccagattcaggtaag
aatgatctaaaagacggtcaaagcaatggtaaacaaaaaagaaagggtaccagaaaagca
atgggacgaataatgcctgatgaggattctgattcagatgctgatgattttgataatgat
gaagctccacttgaagatgaggacgatgatgaattcataaaacgggtgaagaagacgaag
gctgagaaactctccattgttgaccattcgaagattcagtaccttcctttcaggaaaaat
ttctatatagaagttaaagagatttcaaggatgagtgctgaggatgttgcagcctatcgg
aaacaacttgaattgaagatacatggcaaggatgtgccaaaacctgttaaaagttggagt
caaactggtttgacaagtaagttactggacacaattaaaaagcttaattatgaaaaacca
atgcccattcaagatcaagctttaccaattattatgagtggtcgagactgcattggaatt
gctaaaacaggttcaggcaaaactctggcttttgtgctaccaatgttgaggcatattaag
gaccagccaccggttgtacctggagatgggccaattgggcttataatggccccaaccagg
gagcttgttcaacagattcacagtgacatcaagaaattctccaaggtcttgggtattaac
tgtgttcctgtatatggtggatctggtgtcgcgcaacaaatcagtgatttaaagcgaggt
gctgagattgtagtctgtacgccaggcagaatgatagatattctgtgtaccagtagtgga
aagataacgaatcttcgtagggtaacttattttgtcatggatgaagccgataggatgttt
gacatggggtttgaacctcagattacgaggattgtgcaaaatacacggccagatcgacaa
actgtgcttttctctgccacttttcctcgtcaagttgagatattagctcgaaaggtgttg
aacaagcctgtagaaatccaggttgggggacgaagtgtggtgaacagtgatatcactcaa
ttggttgaggtgaggcaagaaagtgagaggtttttaaggctattagagctccttggggaa
tggtatgagaagggtaagatcctgatttttgttcattcacaggagaaatgtgattctttg
tttaaggatttgctgaaacgtggttacccttgcctttcacttcatggtgctaaggatcag
acagatcgggaatccaccattgctgactttaagagtaacgtgtgcaatttgttaattgct
acaagtatagctgctagaggtttggatgtaaaggaacttgaattggttgtcaattttgat
gtaccaaaccactatgaagattatgttcatcgtgtgggcaggactggtcgggctggcagg
aagggctgtgcaatcacatttatttcagaggaagatgcacgatatgctccagatcttgtg
aaagccttggagctctctgagcaagctgttccagatgacctgaaagcacttgctgatggg
ttcatggcaaaagttaaacaagggacggagcgtgcccatgggaccggttatggtggaagt
ggtttcaaattcaatgaagaggaagatgaggctaggagagctgccaagaaagctcaggcc
agagaatatggttttgaggaagacaagtcggattctgagtcagaagatgaaggagttcga
aaggctggtggggatttatcgcaggcagcggctattgctcaagctgctgctttggctgca
gttactaaggtcgctgtaactacaatgccaaccccagttccagcagtgcagttacttgct
aatggagtcctaccttctgtgggcctccctggtgtggctgcacttccgggtacttctctg
cctgtggctagtctgaccaatgatggtgtagctagggcagctgccttagctgctgccatg
aatttgcagcataatttggctaaaattcaggcagatgctatgcctgaacattatgaagct
gaatttgagatcaatgatttccctcaaaatgctcgctggaaggtgacccacaaggacact
ctggttcccatctctgactggactggagcggccattactacaaggggccagtactttcca
ccaggaaagattgctggacctggtgagcgcaagctttacctatttattgagggcccaact
gagtcttcagtgaagaaagctaaagcagaggtgaaacgagtgctagaggactatactgca
caagcattggcacttccgggctctggacagccagaccaagcctctactggaacgtgcttc
tctgcagcattttttggtggagacggtggtcagtttgatggttggcacggtccgactggt
actactctgaagtccataccttcccattttggttttattcctgttactctgaaacctgct
cagattttttcctgtttacgcattcaccattatttaaagctctcccattattttctgggt
ttcgtcatcccatcttgtccagaggctcgtttttgtttccgaccttgtttggcaaccttt
gtttttgttttcctttag
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