Aristolochia californica: 137945340
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Entry
137945340 CDS
T10486
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137945340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137945340
03009 Ribosome biogenesis [BR:
acak03009
]
137945340
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137945340
Spliceosome [BR:
acak03041
]
Complex A
U1 snRNP components
U1 related factors
137945340
Complex B
137945340
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
Helicases
137945340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137945340
NCBI-ProteinID:
XP_068647292
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSRYDSRATDPGSYRDRKSDGTFGRKGGAGFDSARPSNRDGSGNFGNNLPKQDFDGLIPF
EKNFYTESPSVASMTEEEVEAYRRRKQITVEGRDVPKPLREFQDVRFPDYVMQEVIKAGF
VEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLA
PTRELAVQIQQEATKFGQSSKIKNTCIYGGVPKGPQVRDLQKGVEVVIATPGRLIDMLES
HHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFL
YNPYKVIIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ
ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINY
DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLIGILEEAGQTVSSELAAMGR
GAPPASAGHGGFRDRGRGFGGGRPWS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgcgccaccgaccccggttcgtaccgagaccggaagagcgat
ggcactttcggccggaaagggggtgcgggattcgatagtgcgaggccgtcaaacagggat
ggttccggaaacttcggaaacaatttaccgaagcaggattttgatgggcttatccccttt
gagaagaacttctacaccgagtctccctccgtggcgtccatgaccgaggaggaagtggag
gcctaccggcggcggaagcaaatcaccgttgagggccgggatgtccctaaacccctgaga
gagttccaggacgtgaggtttccagattatgtcatgcaagaagtcattaaagctggtttt
gtcgaaccaactccaatccaagcacaggggtggccaatggcgttaaagggtcgtgatctc
attggcattgcagaaacagggtcagggaagacacttgcttatctgttgccagcgattgtc
catgtcaatgctcaacctattttaagtcctggtgatggtccaattgttctagtattagct
ccaacccgtgaacttgctgttcagattcaacaagaagcaaccaaatttgggcaatcatca
aaaataaagaatacatgtatctatggaggagttccaaaggggcctcaagttcgtgatctt
caaaaaggtgttgaagttgttattgctacacctgggaggctgattgatatgttagaatca
catcacacaaacttgaggagggtaacttaccttgtattggatgaggcagatcggatgtta
gacatgggttttgaaccacagattaggaaaattgtctctcagatccggcccgatcgtcaa
actctctattggagtgccacttggccaaaggaggttgaacagctggcaaggcagttcctt
tataatccgtacaaggttattattggttcagcagacttgaaagctaatcatgcaattcgc
cagcatgtagatattgtttcggagaatcagaaatacaataaattggtgaagcttttggag
gatatcatggatggtagtcggattcttatattcatggatacgaagaaaggatgtgaccag
atcacaaggcaacttcgaatggatggttggcctgctctgtcaattcatggagataaaagc
caagctgagagagattgggtcctgtcagaatttaaagctggcaaaagccctattatgact
gctactgatgttgctgctcgtggtttagacgtgaaggatgtgaaatatgtgatcaactat
gattttcccggttcccttgaagattatgtccaccgtattggtcgaacgggccgtgctggt
gccaaaggaacagcatatactttcttcactgctgcaaatgcaagatttgccaaggatctg
attggtatccttgaggaagctggccaaacggtcagttctgaactggctgcaatgggacgg
ggagcccctcctgcttctgcaggtcatgggggcttccgcgaccgtgggaggggctttggt
ggtggacgtccatggagctaa
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