Aristolochia californica: 137946223
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Entry
137946223 CDS
T10486
Name
(GenBank) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137946223
Transcription machinery [BR:
acak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137946223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
POLR3C_WHD
Motif
Other DBs
NCBI-GeneID:
137946223
NCBI-ProteinID:
XP_068648542
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MGIRFFLQWKWVLPVRSPPISSSTTRLQQSSSSSLRSREAASFDSATVSTLSIFPEEYEI
CHKDALKPHTCSFGTLESLERNDSSKGVVKMSIEKTGSFVEVSSTYLASHPENNTYLYTL
LMENLAQIEQSIDNSNLLRLERDILTQIDRLGALSIFYACLSKTIKTPRDVSTAASVAGV
ANDSPVRSRSDNRDKGIVRSVKSMERKFKRKKALSKASKKPISSSSTRTVHNINITLSKL
SSPSSRRLPIARSESEMSKGVKDVANLERIRTSLEERIEMVSFKGWADAVGISEKELQQR
LSCGWECRDRLLKSARSLVQYIARNYRGQGISSEDLVQAGNIGVLQGAERFDPTKGYQFS
TYAQYWIRRSISTFLARHSRGIQMTRLFNNAMITTKKARKVLYNLHKRPPQDEEIAKFTG
ISIANIRLACKYLRVVGSIEQKVGDDTGAKFMEITPDASVSIPEEIVMRQHMIKEIYELL
EGLQPREKQVLMLRYGLGDGRCKSLGEIGSLFGVSKEWIRKIERAALIKLRQGDIQKRLK
HFIEL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcgcttctttctccagtggaagtgggtccttcccgtccgatccccgcccata
tccagttccacgacccgacttcaacaatcgtcatcttcttccttgaggagcagggaagcg
gcttcatttgattcagctacagtgtctaccttgtctatctttcctgaagaatatgaaatt
tgtcataaagatgctctcaaacctcacacatgttcatttggaactttggaaagcctcgag
aggaacgattcatcgaaaggagtggtgaagatgagcatagagaagacaggatcctttgtg
gaggtttcgtctacatatcttgcgagtcatccagaaaataatacctatctctatacactc
ttaatggaaaacctagcacaaatagaacagtccattgacaattcaaacttgttaaggctg
gaaagagatatactcacacagatagacaggcttggagctcttagcatattttatgcatgt
ctatccaagaccattaagaccccgagagatgtatctacagcagcttcagttgctggggta
gctaacgactcccctgtacgcagcagaagtgataacagagacaaaggaattgttcgctct
gtaaaaagcatggagagaaagtttaagagaaaaaaggcattgtcaaaagcttccaagaaa
cctatttcgtcttcatccacaaggacagttcataacattaacatcaccttgtcaaaattg
tcaagcccaagtagcagaagacttccaattgctagaagtgagtcagaaatgtccaaaggg
gtaaaggatgttgcaaatttggagagaatacggacaagtttggaagaaagaattgaaatg
gtaagctttaaggggtgggctgatgctgttggaatcagtgaaaaggaactgcaacagcgg
ttgtcttgtggatgggaatgcagagatagacttctgaaaagcgctcgatctttagttcaa
tacattgccagaaactatcgtggacaaggaatcagcagcgaagatttagttcaggcaggg
aatattggcgttcttcaaggagcagagaggtttgatccgacaaagggctaccaattttcc
acctatgcgcagtattggatccgcagatcaatatcaacttttctagccaggcattctaga
gggatacaaatgactcggctattcaataatgcaatgattacaacaaagaaagcacggaag
gtgttgtataatctccacaaaagaccccctcaagatgaagaaatcgccaagtttactggt
atttcaatagctaatatcagattagcttgcaagtacttgcgagttgttggatctattgag
cagaaagtgggagatgacacaggtgcaaaatttatggaaataacacccgatgcatcggta
agcattcctgaagagattgtaatgaggcagcacatgataaaagagatatatgagctactg
gaagggcttcagcctagggagaagcaagtgctgatgctaaggtatgggcttggggatggt
agatgcaaatcacttggggagataggaagtctttttggtgtcagtaaggaatggataaga
aagatagagagagccgccctgattaagttgaggcaaggagatatacagaagagattaaag
cactttatagagttatag
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