Aristolochia californica: 137948037
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Entry
137948037 CDS
T10486
Name
(GenBank) LOW QUALITY PROTEIN: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137948037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137948037
03016 Transfer RNA biogenesis [BR:
acak03016
]
137948037
Enzymes [BR:
acak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
137948037
Messenger RNA biogenesis [BR:
acak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
137948037
Transfer RNA biogenesis [BR:
acak03016
]
Prokaryotic type
tRNA degradation factors
137948037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
137948037
NCBI-ProteinID:
XP_068650054
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MLANPRFHGGSSSAPLPLRQLRSGSLFFSFSVVSRFSRRPSFPSFSAFPCMWRRKFGVRG
SVESKEAETRSTLDGLQEPYSVKIPVGDRHILVETGHIGRQASGAVTVTEGETILYTSVC
LADLPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRAKDNEVLICRLIDRPLRPTMLK
GFYHETQILSWVLSYDGLHPPDSLAVTAAGIAVALSEVPNSKAIAGVRIGLVNNKFIVNP
TTKEMQESELDLLLAGTDSAILMIEGYCNFLTEEKLLEAVEIGQAAVRAICSEVEALVKK
CGKPKMLGAIKLPPPELYKHVEEIAGNELVKVLQIRKKIPRRKALSALEEKVLTILSEIG
YITTDEPFVNPTDLAQDICEEEDDDEVVVVDGEVDEGDVHIKPVSCKSTPLLFSEVDVKL
VFKEVTSKFLRKRIVEGGKRSDGRSSSNVRFINARCGLLPRAHGSALFTRGETRSLAVVT
LGDKTMAQRIDNLVDEDELKSFYLQYSFPPSCVGEVRRVGAPSRREIGHGMLAERALEPI
LPSQEDFPYTIRVESTITESNGSSSMASVCGGCLALLDAGVPIKGSIAGIAMGMVLDTQE
FGGDGTPLILSDITGSEDASGDMDFKVAGDESGVTAFQMDIKVGGITLHVMKQALLQARD
GRKHILAEMSNCSPPPSRKLSKYAPLIHVMKVRPEKINLVIGTGGKKVKSIIEETGVDAI
DTQDDGIIKITAKDLTSLEKSKAIISNLTMVPTVGDVYRNCEIKSIAPYGVFVEIARGRE
GLCHISELSSNWLAKAEDVVKVGDHLDLKLIEINEKGQLRLSHRALLPDASPQEKTGGKQ
QVSEPSKENIPPQSTSNKVTTENVMKVTVTAKETNPAPDSISSKTLSKEKVTKRMVTSAR
NGTYSNKERQKKSTSKEVGEVTSTQADSLVNGEAKIG
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgaaccctcgctttcatggcggatcttcttccgctcccttacctcttcgtcag
ctccgctctggaagcctcttcttctccttcagcgtcgtgtctcggttttctcggcggcct
tcttttccttcgttttctgcctttccttgcatgtggaggaggaagtttggcgtaagaggt
tcggtggagtctaaagaagcggaaacgaggagcactttggacggattacaggaaccgtat
tccgttaagattcctgttggtgacagacatattttggttgagacgggtcatatcggaaga
caagctagtggtgctgttactgtaacagaaggagaaactattctctacacatctgtttgt
ttggctgatcttccaagtgagccttctgattttttccctctctcagtaaattatcaagag
cgtttttcagctgctggacggacaagtggtggattcttcaagcgtgaagggagagctaaa
gacaatgaggttcttatttgcagattgattgatcggcctttgcgtcctacaatgctgaag
ggcttctaccatgaaacacaaattctgtcttgggttttgagttatgatggtttgcatccc
cctgattctttggcagtcacagcagctggcatagcagtagctctttcagaagtgccaaac
tccaaagcaatcgcgggtgttcgaattggactggttaataataagtttattgtcaatcca
actaccaaggagatgcaagagtcagagttggacttgctgcttgctgggacagattctgcc
attctgatgatagagggctactgcaattttctgacagaggagaagttactggaagccgtg
gaaattggtcaggcggctgttcgagcaatttgcagtgaagttgaggccttggtcaagaag
tgtggaaagccaaaaatgctcggtgctatcaaattacctcctcctgagctctataagcat
gttgaagaaattgctggtaatgaattggtgaaggtattacagataaggaagaaaatacct
agaagaaaggctctctctgcactggaagagaaagttttgactattctttctgaaattgga
tacatcacaacagatgaaccttttgtaaacccaacggacttggcacaagatatatgtgag
gaggaagatgatgatgaggtagtggttgtggatggtgaagtagatgaaggtgatgtacac
ataaagccagtatcatgcaagtctaccccactgttattttccgaggtagatgtgaagctg
gttttcaaggaagtcacatccaaatttttgaggaaaaggattgttgagggtggaaaaaga
agtgacggaaggagctcatccaatgtacgttttatcaatgcaagatgtggactacttcca
agagctcatggaagtgccctttttacacgtggggaaactcggtctcttgcagtggttact
cttggagataaaacaatggcacaaagaatagataaccttgtggatgaagatgaattgaag
agcttttatcttcagtactcctttccaccttcttgtgttggagaagttagacgtgtagga
gcacctagtagaagagaaattggtcatggaatgcttgctgaaagagcacttgaacctatt
ttgccttctcaagaggattttccttacactatacgtgttgagagtacaattacagaaagc
aatgggtcctcaagtatggcatctgtttgtggaggttgtttggccctgcttgatgctggt
gttcccataaaaggttctattgctgggattgcaatggggatggtcctggacacacaagaa
tttggtggagatggaaccccacttattctttctgacattactgggtcagaagatgcttct
ggagatatggattttaaggttgctggagatgaaagtggtgtaactgcttttcagatggat
ataaaggttggaggaatcaccttacatgttatgaaacaagcacttctacaagctagagat
ggccgaaagcacatacttgctgagatgtcgaattgttcacctcctccatcaaggaagctc
tccaaatatgctcctttgattcatgttatgaaggttagaccagagaaaataaacctggtg
attggcactggaggaaagaaagtcaaaagtattattgaggaaactggagtagatgcaata
gatactcaagatgatggcattattaaaattactgcgaaggacttaacaagcttggagaag
tctaaagctataatttccaatctgactatggtcccaactgttggcgatgtgtacaggaac
tgtgaaatcaaatcaattgctccctatggagtttttgttgagattgctcgtggacgtgag
ggtctctgccatattagtgagctaagttcaaattggctggctaaagcagaagatgtggtt
aaagttggagaccacttagatctcaaactcattgagataaatgaaaaaggccaactgcgc
ttgagccacagggcactacttcctgatgcaagtccccaggagaaaacaggtggcaagcag
caagtaagcgagccttcaaaggaaaatatacccccccagagcacctctaataaggttacg
actgaaaatgtaatgaaagtcacagtaactgcaaaggaaacaaatcctgcaccagatagt
atctctagcaaaactctttccaaggaaaaagtcactaagagaatggttacctctgcaaga
aatgggacttatagtaacaaagagaggcagaagaagagtactagtaaagaagttggagaa
gttacttctacacaagccgatagtttagtaaatggagaggctaagattgggtga
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