Aristolochia californica: 137948171
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Entry
137948171 CDS
T10486
Name
(GenBank) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137948171
BRITE hierarchy
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Ortholog
Paralog
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Other DBs
NCBI-GeneID:
137948171
NCBI-ProteinID:
XP_068650253
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Position
Unknown
AA seq
891 aa
AA seq
DB search
MEAAAFPELSSKQKAETLQALASGPLTSSIAKLSASSRAIPSDKDFHFFNNFPEFKNPIK
DIAEKSELMLQSIGSSSHLLFGNQLSFPDDPDDYLDWMVNVNDEILERFDVSIDEFQRIR
KEQEETGGSVGSLDAEGGFQVVYGKKKRGGNEAKAAQQDSAPKVKVASKDQKVGASRKVP
FHIPSIPRPQDRFNILVNNANQPFEHVWLQKSEDSSRFIHPLENISESDFVDRDTKGAEP
VKPLPLESTPFKLVEEVKDLKELAIKLSGAKEFAVDLEHNQYRSFQGLTCLMQISTRTED
FVLDTLKLRVHVGPYLREVFKDPHKRKVMHGADKDILWLQRDFGIYVCNLFDTGQASRVL
QLERNSLEYLLHYFCGVTANKEYQNAEWRLRPLPEEMIKYAREDTHYLLYIYDLMRDRLL
SESNNSDSLLLEVYKRSYDICMQLYEKELLTDTSYLHIYGLLGADFNSEQLAVVAGLSQW
RDVVARQEDESTGYILPNKTLLEIARQLPVSAGKLRRLLKSKHPFVERNVGSVVSIIKSS
IANAVAFQAVSEQLKKAREETALQRSVAIDEGDSGVVPITKDPMSVDSSSAPVDHIVPND
HPMDSLEGSSNQSCIVSSESMPILSQLVQVGEMDSGQESLPSVKPAAVVSIEMRKKPNNA
FGMMLGNSKAKRKVDQDKVENKLEQIKSSVSLPFHSFSGTTELSKPVSHESAKIPLAETV
GKTQTCVPDQIEDIVPLECNSDDENEESENPTTDHLAKQEESCKNGDPESETDMVDDDAS
LVELASGFQDIFQSLNQKRQSKQYERKQGERSETYPPLKPFDYAAARKQMRFGEVDPEKA
VEGDENALELKESSRGSRLKMNEKEGTKDSQQARRRQAFPPSGNRSATFRQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgctgctttccccgagctatcctccaagcagaaggcggaaacgttgcaagca
ttggcctcgggtccgctgacctcttccatcgccaaactgtcggcttcttctagggcgatc
ccttccgacaaagattttcatttcttcaacaatttcccggagtttaaaaatccaatcaag
gacatcgcggagaaatccgagttgatgctgcaaagcatcggttcctcttcgcatttgctg
tttgggaatcagttgagtttccccgacgatcccgacgattatttggactggatggtgaat
gtcaatgatgagattttggagaggttcgatgtttccatagacgagtttcagaggatacgg
aaggagcaagaggaaactggagggagcgtcgggtcgttggatgcggaaggggggtttcag
gtggtttatgggaagaagaagagaggtgggaatgaggcaaaggccgcgcaacaagattcg
gctcctaaggtgaaagtggcttcaaaagatcagaaggttggggcttcccgaaaggtcccg
ttccatataccgtctattcctcgtcctcaggacaggtttaacatcttggtcaataatgcg
aaccagccgtttgagcacgtttggctgcaaaagagcgaggatagcagcaggttcatacat
cctttggaaaatatctctgagtcagattttgttgatagggatactaaaggtgccgagccg
gttaaaccacttccattagaaagtactccgttcaagcttgttgaagaagttaaagatttg
aaggagttggcaataaaattaagtggagctaaggaatttgctgtcgatttagagcacaat
cagtacagatcctttcagggactaacttgcttgatgcaaatttctactagaactgaggat
tttgtgttggacacactaaagcttcgtgttcatgttggtccatatcttcgagaagttttt
aaagatccccataagaggaaggttatgcatggggcagacaaagatatactgtggcttcaa
cgtgattttggcatttatgtatgcaatctatttgacacaggacaggcctcaagggttctg
caattggagcgaaatagcctggagtatctcttgcattatttttgtggagtcactgcaaac
aaagaataccagaatgcagagtggcggcttaggcctcttcctgaggaaatgatcaaatat
gcaagagaagatacacactatctcttatatatttatgaccttatgagggacagattgctt
tcagaatccaacaatagtgattcccttctattagaggtatacaagcgtagctatgacata
tgcatgcagctttatgagaaagaactcttaacagatacatcgtatctgcatatatatggg
ttactgggagctgatttcaactcagaacagctagctgttgttgcgggccttagtcaatgg
agagatgttgttgctcgacaagaggatgagagtactggctacatattgccaaacaaaact
ctacttgagattgccaggcaactccctgttagtgctggcaaattacgtagattattaaag
tcaaagcacccatttgtggagagaaatgttggctccgttgttagcattattaagagctcc
attgctaatgctgtagctttccaagctgtctctgagcagctgaagaaggcacgggaggaa
accgcactccagagaagtgttgcaattgatgagggtgattcaggagttgtgcccatcacc
aaggatcctatgagcgtagattcatcatctgctccagtggatcatattgtgccaaacgat
catcccatggactctttagaggggtcaagcaatcaatcatgtattgtatcatctgaaagc
atgcccattttgtctcaactcgtccaagttggtgaaatggatagtgggcaagagtcttta
ccttctgtgaaacctgctgctgtagtatccattgagatgcggaagaagccaaataatgcc
tttggaatgatgttaggaaattcaaaagctaagagaaaggttgatcaggacaaggtcgag
aacaagttagagcagataaagtcctctgttagcctaccgttccattcattttcaggcaca
acggaactgtcaaaaccggtttcacatgagagtgccaagatccctcttgcagagactgtt
ggcaaaactcagacttgtgtgccggatcaaattgaggacatcgtgcctcttgaatgcaat
tcagatgatgaaaacgaagaatctgaaaacccaacaactgaccacctagcaaagcaggaa
gaaagttgcaaaaatggggatccagaatcagaaacagacatggtcgatgatgacgcttca
ttggttgaattggcctctggtttccaggatatcttccaatcactgaatcaaaagagacaa
tcaaaacaatatgagaggaaacagggagagagatccgaaacataccctccactgaagcct
tttgactatgctgcggctaggaaacaaatgagattcggggaggttgacccagagaaggcg
gttgaaggtgatgagaacgccctcgagcttaaggagtctagcaggggttcaaggttgaag
atgaacgagaaagaagggacgaaggattcacaacaagcaagaagacgacaggcttttcca
ccttcgggaaaccggagtgcaacatttcgccagtga
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