KEGG   Aristolochia californica: 137948198
Entry
137948198         CDS       T10486                                 
Name
(GenBank) transcription initiation factor TFIID subunit 5-like isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
acak  Aristolochia californica
Pathway
acak03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    137948198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acak03021]
    137948198
   03036 Chromosome and associated proteins [BR:acak03036]
    137948198
Transcription machinery [BR:acak03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     137948198
   Coactivators
    SAGA/TFTC/STAGA complex
     137948198
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     137948198
    STAGA complex
     137948198
    TFTC complex
     137948198
    SAGA complex
     137948198
    SLIK complex
     137948198
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_Vps41 Ge1_WD40 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N LisH_PAC1 WD40_like Beta-prop_VPS8 LisH Cytochrom_D1
Other DBs
NCBI-GeneID: 137948198
NCBI-ProteinID: XP_068650297
LinkDB
Position
Unknown
AA seq 664 aa
MEEEEIEKAVLAYLNKKGFKQTELALQEEQSKSSSNTQTDPGVARRIISFSESENIPARY
MEGYSKLRSWTYNSLDLYKHELLRVLYPVFIHSFLDLVAKGHVQEARTFFSRFREDHEMM
HARDLLKLDDILTPSHLHEMEFAHSLRQSKVNIKICEYSKELLMQYLQKMEPFTVLGVIN
EHINIQVSPGQPSSISDDTDAVTLIGGSQDTAKQINQKEIRWGLLEDSSKERMERASSLV
SYLEKAEGESKKGDSEDNKKKLAEGGKQGNTSRKLKKDKVVGATSKTVRSETHSISVASR
VMTEVSLPTIPTEVEHAVLEDLRVRVQMGSLALPSVSFYTFINTHNGLNCSSISQDGSLV
AGGFSDSSLKVWNMSKIGQQVDASYVQPENDSNPNGNLLGSENGKRSYTLFQGHAGPVYS
ATFSPLGDFILSSSSDSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPSGHYFASSSHDRT
ARIWSMDRISPLRIMAGHLSDVDCVQWHTNCNYIATGSSDKTVRLWDVQSGECVRIFIGH
RSMVLSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLMGHTSCVWTLAFSCEGTLLAS
GSADCTVKLWDVTTSVRGPKTDESKTGGANRLRSLKTLPTKSTPVYSLQFSRRNLLFAAG
VLSK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggaggaggaagagatcgagaaagcggttttagcgtatttgaacaagaagggtttcaaa
caaacagaacttgctcttcaagaagaacagagtaaaagctcctcaaatacacagactgat
cccggcgtcgccaggcgaattatatctttctctgaatcagagaatatcccagcacgatac
atggaaggttacagcaagcttaggtcatggacatacaattcattggatttatacaagcat
gaattgcttcgggtgctgtatccagtgtttatccattcctttctggatcttgttgccaaa
ggacatgtgcaggaagcaagaactttcttcagtagatttcgtgaagaccatgagatgatg
catgcaagagatctgctaaagttggatgacattcttactccctctcacctgcatgagatg
gaatttgctcattctctgaggcaaagcaaagtcaatattaagatttgtgagtactcgaaa
gagcttctcatgcaatatctacagaagatggaaccttttactgtgcttggagtaatcaac
gagcatattaatattcaagtttctcctggacagccaagctccatctctgatgatacagat
gctgtaaccttaattggaggtagtcaggatactgctaagcagataaatcagaaagaaata
cgttgggggttacttgaggattcttcaaaagaacgcatggagagggcctcaagtttggtt
tcatatcttgaaaaggcagaaggtgaaagcaaaaagggggattctgaagacaataagaag
aagctagcagagggaggaaagcaagggaataccagtaggaagttgaaaaaggataaggtt
gttggagctaccagcaaaactgttcgttccgagacacactccatctccgtggcttctcga
gtgatgacggaggtttctttgccaacaattccaacagaagtagaacatgcagttcttgag
gacctaagggttcgtgtgcagatgggtagcttggcattgccatctgtcagcttctataca
tttattaacactcataacggattgaactgctcatcaatatcccaagatgggtccctggtg
gctggtggtttctcagattcatcactaaaggtctggaacatgtcaaagatcgggcaacaa
gtggatgcttcctatgtgcaaccagaaaatgactccaaccctaatggaaacttgctggga
tccgagaatgggaaaagatcttacacattatttcagggtcatgctggacctgtttattct
gctacatttagtccactgggggactttatcctttcttcttcatcagactccactgttagg
ttgtggagcacaaaactcaatgcaaatcttgtgtgttacaagggtcacaattatccagtg
tgggatgttcagtttagtccttcaggacattattttgcaagctcatcacacgatcgaact
gctaggatttggtctatggacagaatcagtcctttaagaataatggctgggcatttatca
gatgttgattgtgtacagtggcatacaaactgtaactacattgcaactggttctagcgac
aagacggttagactatgggatgtccaaagtggagagtgtgtacgcattttcatcggccat
agaagtatggtactgtcattagcaatgtccccagatgggcggtatatggcatctggtgat
gaagatggaacgatcatgatgtgggatctttcaagtggccggtgtgttacacctctaatg
ggccatacatcttgtgtttggacgcttgctttcagttgtgaagggacattgctggcttct
ggatctgctgattgcactgtaaaactatgggatgtcacgacgagtgtaagaggtccaaaa
accgacgaaagcaaaactggaggtgctaacagactgaggtcattgaaaactttgcccaca
aaatcaactccagtctattccttgcagttctccaggaggaatcttttgtttgcagcaggg
gtgctctcaaaatga

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