Aristolochia californica: 137948205
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Entry
137948205 CDS
T10486
Name
(GenBank) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
acak Aristolochia californica
Pathway
acak04120
Ubiquitin mediated proteolysis
acak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137948205
04120 Ubiquitin mediated proteolysis
137948205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137948205
Enzymes [BR:
acak01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137948205
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137948205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-HC5HC2H
FlxA
Motif
Other DBs
NCBI-GeneID:
137948205
NCBI-ProteinID:
XP_068650306
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MIRLRTYAGFSLVGAIAIVYHAFRSRDQFYPATVYLSTSKISLVLLMNMGLVILCTTWQL
MKLLFLGSLREAEVERLNEQSWRELVEILFAITIFRQDFSVSFLTMVTVLLLIKALHWLC
QKRVEYIETTPSVPLLSHVRIVSFMGFLLLLDSLFLYSSMKYLIETWRPSVSLFFSFEYM
ILTTTIISTFAKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLFFFLTIFVNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELSASDATCIICREEMV
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENTATRGAHGVHSDPHRYGTAPVG
ASTQGSAEACAAGDALSQHKARLEAAAVAASVYGKSFVYPYRNALSWPTCYNSITGDDQS
GNADLSGDAAISSRRQEHQNSGFSKFPHHVFGAFQMANGNSSNPNVSNSLLEAQERFLQL
QIEALQSQLLHLRQQQQQLPSGSAVPSSTDSKGKAPLAVAASVSDCGHHGNGEDADTV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatacggcttaggacctatgctggttttagtttggtgggtgcaattgccattgtgtat
catgcctttagaagcagggatcaattttatccggctactgtatacttgtccacttccaag
atcagcttggtgcttcttatgaacatgggcttggtcatcttgtgcacaacgtggcagcta
atgaagttactgtttcttggctctctccgagaagcagaagtagagagattgaatgaacaa
tcatggcgggaacttgtggaaattctctttgcaattacaatatttcggcaagatttctct
gtttcctttcttacaatggtcacagtcctcctgctgattaaagctttacattggttgtgc
caaaagagagttgagtacattgagacaactccctctgttcccttgttgtctcatgtgcgg
attgtttcttttatgggtttccttcttcttctggattctctcttcttgtacagctcgatg
aagtatttaattgagacatggcggccttccgtttcactcttcttttcatttgagtatatg
atactgactacaactattatttcaacatttgctaagtatgttttctatgtaagtgacatg
cttatggaagggcagtgggaaaaaaaggctgtctacaccttctacttggaacttatccgt
gatctgcttcacttgtcgatgtatctcttcttcttccttactatcttcgtgaattatggt
gtaccactacacctgatcagagaactgtatgagacatttcgtaatttcaagattcgtgtc
gctgattacattcggtatcggaaaatcacatctaatatgaacgaccgcttccctgatgca
acccctgaagagcttagcgcaagtgatgcaacctgcatcatttgccgtgaagagatggta
actgctaaaaaattgatatgtgggcaccttttccatgttcattgtctacgatcctggtta
gaacgacaacacacatgtccaacctgcagagctctggttgttcctcctgagaacactgca
actagaggagctcatggagtgcattctgatcctcatagatatgggacagctccagtgggt
gcatcaactcagggatctgcagaagcttgtgcagctggtgatgccctcagccagcacaag
gctaggctcgaagctgctgctgtggctgcttcagtttatgggaaatcatttgtgtatcca
tatcgtaatgcactttcatggcccacatgttataattccatcacaggtgatgatcagagt
ggaaatgctgatttatctggggatgcagccatatctagccgaaggcaggagcatcaaaat
agtggattttcaaaattcccacatcatgttttcggtgcctttcagatggctaatggcaac
tctagcaatccaaatgtctctaattctctcctggaggcacaagagagatttctccagctg
caaatagaggctcttcaaagtcagttgctgcacctgcggcagcagcagcagcagttaccc
agtggaagtgcagttccttcctcaacagacagcaaaggtaaggcccccttagctgtagct
gcatctgtatctgactgtggccaccatggaaatggtgaagatgctgacacagtgtag
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