Aristolochia californica: 137948220
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Entry
137948220 CDS
T10486
Name
(GenBank) uncharacterized protein isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137948220
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137948220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137948220
NCBI-ProteinID:
XP_068650324
LinkDB
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Position
Unknown
AA seq
903 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDIFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKQIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKAETRDWLNNVVSELESQIDAFEAEVEGLSVKKGKQRPPRLIHLETSIARHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVAIGPPALVKGVASGAGAVLGLKSSIATSPSHVPSAQGTALDQSEETASQDSNSDI
PPRTPPSIKNGSLSSPISLSSSGIGSGTPTGTSTDAGPGNISSRTMVGGPSASSILSGSG
YARGAVENSTSLSTSPVNPSSSVKEDDGANFPGRGPSPALTEIGVSSLGRGSVVGAVSSQ
PSSVPLSLSSGTGIASNGALGSSPTISDMAKRNVLGLDERMQPLVSPLSGRMLLQQSSKA
TDGTPSTDSSSVGDSAVIGGRVFTPSVVSGVQWRPHTANSFQNQNEMGQFRGRTEIAPDQ
REKFLQRLQQVQQQGHSTLLGVPHLSGAKQFSTQQSNSLLQQFNTQTTSLAPQVGIGLGV
QSPGSLSAVNSSLAQQNVMHQQTVISSGPKDADVGHVNLDDQQQQQNISDDINVELPSNS
GLSKTIPVDDDLKTPYAVDSSAGSSNAFADAVQVPRDTELSPGQPFQSSQSSANLGVIGR
RSASDLGAIGDNLSSSTITSVGMHDHLFNLQMLESAFYKLPQPKDSERPRNYIPRHPAVT
PASYPQVPAPIVDTPAFWERIGGDGYTNGTDTLFFAFYYQQNTYQQYLAARELKKQSWRY
HRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFYIANDEVQNGWCQRIKTEFTFEYCHLEDE
LVV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaagcagaaaactccagggcgagatcgatcgagttctgaaaaaggttcaggaa
ggagttgatatcttcgacagcatatggaacaaagtctacgatacggagaatgccaaccag
aaagagaaatttgaagctgatctgaagaaagagattaagaagcttcagcggtatagagat
cagatcaaaacatggattcagtcgagtgagataaaggacaaaaaggttagtgcctcttat
gagcaggctctgctggatgctcgtaagcaaattgagcgtgagatggaacggtttaaagtt
tgtgagaaggagacaaagacaaaagccttttctaaagaagggcttggtcagcaaccaaaa
actgacccaaaagaaaaggctaaagcagagacaagggattggttgaacaatgtggtgtca
gaattggagagtcagattgatgcatttgaagccgaggttgagggattgtctgtgaagaaa
gggaagcagaggccacctcgcctgatacatttagagacatccattgcaagacacaaggct
catataatgaagctagagttgattttaaggctgctggataatgatgaattgagccctgaa
caagtcaatgatgttaaggattttcttgatgactatgttgaacgcaatcaggaggatttc
gatgaatttagtgacgttgatgagctttatagttccttacccctagacaaggtggaatcc
cttgaagatctggttgccattggtcctccagctcttgttaagggtgttgcttctggtgct
ggtgcagtcttaggcttgaagagctccattgccacttctccttctcatgttccttctgct
cagggtactgctctggatcaatctgaagaaacagcttcccaggacagtaactccgatatt
cctccaagaactccaccttccattaaaaatggttctctgagctcaccaatttcattaagt
tcgtctggtattggttctggcactcctacaggaactagcactgatgctgggcctggcaat
atctcttcacgtaccatggttggtggtcctagcgcatcatccatcctttctggttctgga
tatgctcgaggtgctgtggagaactccacttctctttccacatcgccagttaacccatct
agttcggtaaaggaagatgatggtgcaaactttcctggtcgtggaccatcacctgctctg
actgagattggagtgtcaagtcttgggcgtgggtcagtggtaggagcagtatcaagtcaa
ccatctagtgttccattaagtttgagttctggaacaggaatagctagcaatggtgctctt
ggttcaagtcccacaatctctgatatggcaaagagaaatgtattagggttggatgagaga
atgcagcccctggtttcacctttgagtggtagaatgcttttgcaacaaagttctaaagct
acagatggaacaccttcaactgactctagcagtgttggtgacagtgctgtaataggtggg
cgagtcttcaccccttcagtagttagcggggtgcaatggagacctcatactgcaaattca
tttcagaatcagaatgaaatggggcagttccgtggaaggactgagattgcacctgatcag
agagagaagtttctgcagaggctccagcaagtgcaacagcaaggtcatagtaccctactt
ggtgtgcctcatctatccggcgctaagcaattttctactcaacaatcaaattcactccta
cagcagttcaatactcagaccacatctctggcacctcaagttgggattgggcttggtgta
cagtctccagggagcctctctgcagtcaattcttcattagctcaacagaatgtaatgcat
caacaaacagtaatctcaagtggaccaaaggacgcagacgttggacatgtgaatcttgat
gaccaacaacagcagcaaaacatatctgatgatataaatgtagagctgccttcaaattca
gggcttagcaagactatccctgtggatgatgatttgaaaacaccatatgccgttgattca
tctgctggaagttctaatgctttcgcagatgctgtgcaagtaccaagagatacggagcta
tctcctgggcaaccatttcagtcaagtcaatcttcagctaacctgggtgtgattggtcga
agaagtgcttctgaccttggtgctattggtgataatctcagctcatcaactataacatct
gtaggaatgcatgatcatctatttaatttgcagatgctagagtctgctttttataagctc
cctcaacctaaagactcggaacgtccaaggaactatattccgcgacatcctgcagtgact
cctgctagctaccctcaagtgccagccccaattgttgacaccccagccttctgggaacga
attggtggggatggatatacgaatggtactgatactctgttctttgcattttactaccag
cagaatacatatcaacagtatttagctgcaagggaactgaaaaaacagtcatggagatac
catcgaaaatacaacacatggtttcagcggcatgaggaacccaaagtcacaactgatgaa
tatgagcagggcacatatgtatacttcgatttctacattgcaaatgacgaagtgcaaaat
ggatggtgtcagagaatcaaaactgagttcacatttgagtactgtcatcttgaagatgaa
cttgtcgtatag
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