Aristolochia californica: 137948557
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Entry
137948557 CDS
T10486
Name
(GenBank) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137948557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137948557
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137948557
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137948557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
REGB_T4
Motif
Other DBs
NCBI-GeneID:
137948557
NCBI-ProteinID:
XP_068650745
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MPADEKKPVILIRRVWAQNVVSEFELIKSLLPRFHYVSLDTEFPGCVFQSPSVRERNQPQ
VRYQVLKLNVDALKLIQLGLTLCDADGNLPHLGTNCRYAWEFNFSDFDVSRSLQAPSAIS
MLKENGIDFERNRREGISSLHFADLMFSSGLVGNGDVHWVSFHGSYDFGYLVKILTQSSL
PELLTDFMELLTAFFGSSLFDVKYIGSKMKLYGGLERLAKLLQVERAAGNAHQAGSDSLL
TSQTFIKMSRKFELEANSFAGIVYGLNEKYWAC
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacgagaagaagccggtcatcttgatccggcgggtgtgggctcaaaatgtc
gtctctgaatttgagctgatcaagtctttgcttcctcggttccactacgtctctctggac
accgagttccctgggtgtgtttttcagtcgccctccgtccgtgaaagaaaccagccacaa
gtccgttaccaggtgctcaagttgaatgtagacgctttgaagcttattcagcttggactc
actctctgtgatgccgacggaaacctccctcatctgggtaccaactgccgttacgcctgg
gagttcaacttctccgactttgacgtctcccgcagcctccaagctcccagcgccatctcg
atgctgaaagagaatggcatcgattttgagcggaacaggagggaggggatttcttccctc
cacttcgccgatttgatgttctcctccgggcttgttggtaacggcgacgtgcattgggtc
agtttccacggctcctacgacttcggctatctcgtcaagattttgacgcagagcagctta
cctgaactcttgaccgacttcatggaattgttgactgctttctttgggtcgtcactgttc
gacgtgaagtatattggttccaagatgaagctctacggcgggctagagcggctggcgaag
ctgctgcaggtggagcgcgcagcgggcaatgcccaccaggctggctcagacagtcttctc
actagtcagacttttatcaagatgtcacggaagtttgaactggaggctaacagcttcgct
ggaatcgtttatgggttgaatgagaagtactgggcttgttga
DBGET
integrated database retrieval system
