Aristolochia californica: 137948617
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Entry
137948617 CDS
T10486
Name
(GenBank) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137948617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RMF
Motif
Other DBs
NCBI-GeneID:
137948617
NCBI-ProteinID:
XP_068650814
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MESGSCVARRTRSRKTPTVPAIPPRGKEEARIHQCDGKSKEFNSGCGGTRALELKEESCF
SRESKGVEILDVDHDGEQGDEAEEDEEREEEEEEEVEEEGEEEDDADADDDDGYEVEEVS
AEEECFPQSRRKQQTENEQPSVSDRPKEDKKAECVVITDDDDENDVGSESSKHSCECYVL
RKTTRPIQHPNPIMRGILSLDSYSFSHSLSAEEGEQERSNGGREASVSTSEVAMEEEIER
MFFSRKRALGIDVLVPTRETLGEAMSQGSGVAGRTRSRCPFRSTKKGGTFSRPFVLESSE
EENPFDPAAAEDAVRSKKEEGSSSTDDAVSNSEKEEYDSSGSEVYRKNERIRKGKFSKRK
QGRASKDDAFFKLLVNTVWGTGATYPEELNSSPPAEFCQPKVRAPEIDELMLQLKFPYNE
EEMSTVREKSEMESLEDELWTKLDFAMRLTEMGSFESGVDSKETCAADKEMDQSILCQNG
KHEYILNEKVGITCRYCGFLKVNIRHVFPRMVRNHWRKSGQWKHDGGEDPMEWDGSRMQD
TYDDSPVLEILPPGTVWDIVPEARKTMHHHQREGFEFMWKNLAGSIFLRELKSSCSDVMG
GCVISHAPGTGKTLLTIVFLQTFIEVFPDCRPIIVAPQNMLLSWEREFKKWNVNVPFHIL
NRKELSGKEDDLILKLFHKKRSLQRNMNDVRMVKLYSWNKGKSVLGLSYPLFQRLAENQN
SNNEQSAQIAKILLEKPGLLVLDEGHTPRNSKSLIWKALVKIKTERRIILSGTPFQNNFN
ELYNVLCLVRPRFADSLSSRISGKSFMMPKRKRPRWEWDVLTSSIGKPTDDNLEELRSIL
DPFVHVYKGSILKNLPGLRESLVVLHPYPQQKQVLDSIQNIPARNCMGRECAVSLISVHP
SLITTCSLSEEEESVIDKHQLERVRDDPNEGVKTRFVMELIRLAGALGEKVLVFSQYIEP
LEFIKKHLITQFNWTEGKEVLQMDGSIVMKHRQSRIDSFNDPFSEVKVLLASTKACCEGI
NLTGASRVVLLDVVWNPSVERQAISRAYRLGQTKFVYTYHLIASGTNDEDKYSIQVKKER
LSELVFSSTDCQMDNQSNPSKGFEDKILEEMVYHEKLKSMFAKISCHLKKTLHL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgggctcctgcgtagccagaagaactcgctctcggaaaacccccactgtgccg
gcgattcccccccgcggaaaagaagaggctcggattcaccaatgcgacggtaaaagtaag
gaatttaattcaggctgtggtggaactagggctcttgaattaaaggaggaatcctgtttc
agtagggaaagcaaaggtgttgaaattctcgatgtggatcatgacggcgaacaaggagac
gaagccgaggaggacgaggagagggaggaggaggaagaagaagaggtagaggaagaagga
gaagaagaagatgatgctgacgctgatgatgacgacgggtacgaggtggaagaggtcagc
gcggaagaggagtgctttcctcaatcacgtaggaaacagcagacggaaaatgaacagcca
agcgtgtctgaccgtccaaaggaagacaagaaggcggagtgtgtcgtgatcactgatgat
gacgatgaaaacgatgttggttcagagtccagtaaacattcttgcgagtgttatgtgtta
aggaagacgactaggccgatacagcacccgaatccgatcatgaggggaattctttcgcta
gactcttacagtttctcacactctttatccgcagaggaaggtgagcaagaaaggtctaat
ggtgggagagaagcgtctgtgagcactagcgaagtagccatggaggaagaaattgaaaga
atgttctttagtagaaaaagagctttaggaattgatgttctcgttccgacccgagaaact
cttggagaagctatgtctcagggttcaggcgttgctggacgcacacgttctcgatgtcct
tttagaagcacgaagaagggtggaacttttagccggccatttgtcttggagagttctgaa
gaggaaaacccctttgatcctgcagccgctgaagatgctgttagaagcaagaaagaagaa
ggttcttccagcactgatgatgctgttagcaacagcgaaaaagaagaatatgacagtagt
ggaagcgaagtttacagaaagaatgaacgaataaggaagggaaagttcagcaagagaaag
cagggccgcgcatccaaagatgatgcatttttcaagcttcttgttaatacagtttggggt
acgggggcgacatacccagaagaattgaattcttccccacctgctgaattttgtcaacca
aaagttagagctccagagatagatgaattgatgcttcaacttaaatttccatataatgaa
gaggaaatgtcaacagtaagagaaaaatcagagatggaaagcttagaggatgagctatgg
actaaattagatttcgctatgcgtttaactgagatgggatccttcgagtctggtgttgac
agcaaggaaacatgtgctgcagataaggaaatggatcaatctatactgtgtcaaaatgga
aaacatgagtacatcctaaatgagaaagttggaatcacatgcagatattgtggttttcta
aaagtaaatatcagacatgtttttccgcgtatggtgaggaaccattggagaaaatcaggg
caatggaaacatgatggtggtgaggatcctatggagtgggatggttcccggatgcaagat
acatatgatgattcaccagtcttagaaattcttccgccaggaacggtatgggatatagtg
ccagaggctcgcaaaaccatgcatcaccaccagcgtgagggctttgagtttatgtggaaa
aatctagctggcagcatttttctcagggagctgaagtcttcatgttctgatgtcatgggt
ggctgtgttatttcacatgctcctgggactggaaagacccttttgacaattgtctttctc
cagacattcatcgaggtctttcctgattgccgaccaatcattgttgcaccccagaacatg
ctcctctcatgggagagagagttcaagaagtggaatgtaaatgtgccatttcacattctt
aatcggaaggaattatctggtaaagaagatgacctaattctcaagctttttcacaagaaa
aggtctttgcagcgaaatatgaatgatgtgcgcatggttaagttatattcatggaataaa
ggaaagagtgtactaggattgagctatcctctgtttcagaggcttgcagaaaatcagaat
tcaaacaatgagcaatctgcacagattgctaaaatcctcctggaaaagcctggcttgtta
gttcttgatgaagggcatacaccacgaaacagcaaaagtctcatttggaaagctctggtc
aaaatcaaaacagagcgtaggatcattctttcaggaaccccctttcagaacaatttcaat
gagctttacaacgtactatgtttggttagaccaagatttgctgacagtctctcatctagg
atctctggaaaaagcttcatgatgccaaaaaggaaaaggccgagatgggaatgggatgta
ttgactagttctattggcaaacctactgatgataatttagaagagctccggtccatatta
gatccttttgttcatgtttataaggggagtatcctgaaaaatcttcctgggttgagggag
tctttggttgtcttacatccataccctcaacagaagcaggttctagacagcattcagaac
atacctgcaaggaactgtatgggacgagaatgtgcagtttctctaatttcagttcatcct
tcacttataacaacatgttctctttctgaagaagaagaatctgtcatagacaaacatcag
ctagaaagagtgagagatgacccaaatgaaggagtgaagacaagatttgtcatggagctc
attcgactggctggagcattaggtgagaaagtattggtattcagccaatatattgaacca
ttagagttcataaaaaaacatctcataactcaatttaattggacagaagggaaagaggtg
ctgcaaatggatggaagtatagttatgaagcaccgtcagtctaggattgactctttcaat
gatccattcagtgaagtaaaggttttgctagcgtccacaaaagcttgttgtgagggtatc
aatttgactggagcttccagggtggttctccttgatgttgtgtggaacccttcagtggag
agacaagccatcagcagggcctataggttggggcagacaaagtttgtttacacttatcat
ctcattgcatcaggaacaaacgatgaggataagtacagtattcaggttaagaaggagaga
ttatctgaattagtattctcttctactgactgccaaatggataaccagagtaacccatca
aagggtttcgaagataaaatcttggaagaaatggtttaccatgaaaaactcaaaagcatg
tttgctaagataagttgtcatctaaagaagacacttcatttgtag
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