Aristolochia californica: 137948684
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Entry
137948684 CDS
T10486
Name
(GenBank) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
acak Aristolochia californica
Pathway
acak03030
DNA replication
acak03410
Base excision repair
acak03420
Nucleotide excision repair
acak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137948684
03410 Base excision repair
137948684
03420 Nucleotide excision repair
137948684
03430 Mismatch repair
137948684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acak03032
]
137948684
03400 DNA repair and recombination proteins [BR:
acak03400
]
137948684
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137948684
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137948684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
Rad17
AAA_22
AAA_19
AAA_30
PTCB-BRCT
BRCT_2
nSTAND3
AAA_assoc_2
AAA_18
RuvB_N
Sigma54_activ_2
AAA_5
Gp44_lid
Zeta_toxin
RNA_helicase
NTPase_1
AAA_14
AAA_24
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
137948684
NCBI-ProteinID:
XP_068650914
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MQSDIRKWFMKQHDKGNGHTPKPAKASQIAPASEKPSPTASKPTKQPVEQGQDKAGRRKT
SKYFASNTSESSEKQKQADEIKPEKSQAKRKTSKSDDDDDDFVPSSARNKPAEVSPAKKL
KSGSGKGIRQKSVDGDEDDDVDEAVKTPLKGSGRGGGGGRAGTGPSGGRGRGGGRGGFMN
FGERKDPPNKGLKEVPEGAPDCLQGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKK
TNYLLADEDIGGRKSSKAKELGTAFLTEDGLFEMIRTSKKSKVEQEELKKITERADLPVL
KSKQVKVEANSNYDRGGKSLVAKSPAKGSSATAKRKGSDLQNSLTWTEKYRPRVPNDIVG
NQSLVKQLHDWLAHWDEHFLHTAHKGKGKKQNDGGAKKAVLISGSPGIGKTTSAKLVSQM
LGYQITEVNASDTRGKADSKIAKGVGGNTSNSIKELVNNESLSVNMDRSKHSKAVLIMDE
VDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRKPTKQQMAK
RLMQIASAEGLKVNEVALEELADRVNGDIRMALNQLQYMSLSLSVINYDDVRQRLLSSAK
DEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLIVQENYINYRPSSIGKDDGVK
RLNLIARTAESIGDGDIVNVQIRRYRQWQLSQLGSLASCIIPAALMHGQREILEQGERNY
NRFGGWLGKNSTMGKNVRLLEDVHVHVRASLECNTDRTTLRTDYLPVLLKQLTDPLRQLA
KDVAVQKVVKLMDAYSLSQEDFDTIVELSKFQGRPNPLDGIQPAVKAALTKAYKQGSSSR
VVRAADLITLPGLKKPPKKRIAAMLEPVDDSVPEENGEPLADGEEEDSSDAEDADATIIG
EKKPQLDLQSDKSKGIQVQLNLKNAGDSTSKKTPTTATKSRGSGSTGRGGRGSGATKRKR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggatattcggaaatggttcatgaaacaacatgataaggggaatggccataca
ccaaagcccgcaaaagcctctcaaattgctccagcatcagaaaaaccttctcctactgcg
tcaaaacccacaaagcaacctgttgagcagggtcaggacaaagctggaaggaggaaaacg
agcaaatactttgcgtcaaacacatctgaatccagtgaaaaacaaaagcaagcagatgaa
ataaagcctgaaaagtctcaagcaaaaaggaaaactagtaaaagtgatgatgatgatgat
gactttgttccatccagtgctaggaataaacctgctgaagtaagccctgcaaagaagttg
aaaagtggttcaggtaaaggaatccgtcaaaaatctgtagatggtgacgaagatgatgat
gttgatgaagctgttaaaacacctcttaaagggagtggtagaggtggtggtggagggcga
gctggaacaggtcctagtggtggtagagggagaggtggggggcggggtggatttatgaat
tttggggaaagaaaagatcctccaaacaaaggcctaaaggaagttcctgagggggctcct
gattgcttacaagggctgacttttgtgattagtggcacacttgacagtctggaaagggag
gaagcagaagatcttattaaacgacatggtgggcgtgttactggatcaatcagcaaaaaa
acgaactatcttctggctgatgaagatatcgggggccggaagtcttcaaaagcgaaggag
ctgggcactgccttcttgactgaggacggactgtttgaaatgatccgcacatctaagaaa
tcaaaagttgagcaggaagagttgaaaaaaattacggaaagagctgacctaccagtgctg
aagagcaaacaagtcaaagtagaagcaaatagtaattatgaccgcggtggcaagtctttg
gttgcaaaaagtcctgcaaaaggttcttctgctaccgccaagagaaaaggctcagatctt
caaaattcacttacatggactgagaaatacagaccaagagttccaaatgatatcgtgggc
aatcaatcactggttaagcagcttcatgattggttggctcattgggatgaacatttcctg
cacacagcccacaagggcaaggggaaaaaacagaacgatggtggagctaaaaaagctgtg
ctaattagtgggtcgccaggtattggaaagactacttcggcaaagctggttagccagatg
cttggataccagataactgaggttaatgccagtgatacccgtggaaaggctgactctaaa
attgcaaaaggagtaggtgggaacacatcaaattctataaaggaacttgttaacaatgaa
tctctcagtgttaacatggataggtcaaagcattcaaaggctgtattaataatggacgaa
gttgatggtatgtctgctggagatcgaggtggagtggccgatcttattgccagcataaaa
atttccaaaattccaattatttgtatatgtaatgatcggtacagtcagaagcttaaaagt
cttgtcaactattgtctgcctctcaactttagaaaaccaacaaaacagcagatggcaaaa
agattgatgcaaattgctagtgcagaaggtcttaaagttaatgaggttgcacttgaggaa
cttgcagatagagtcaatggggacattcgcatggctctgaaccagttgcagtatatgagc
ctttctctctctgtcattaactatgatgatgtcagacagcgacttcttagcagtgcaaaa
gacgaagacatatcacccttcactgctgttgacaagctgtttggttataatgggggaaag
cttcggatggatgagaggattgatttaagcatgtccgatcctgatttggtgcctctaatt
gtccaggaaaattacatcaactatagacctagttctattggtaaggatgatggagtcaaa
cggttgaacttgatagctcgtactgcagaatccattggtgatggtgacattgtaaatgta
cagattagaagatacaggcagtggcaactatctcagttggggtcacttgcttcttgtata
atacctgctgccttgatgcatggtcagagggagattcttgaacagggagagcgtaattat
aataggtttggtggttggcttgggaaaaactctacaatgggcaagaatgtaagactttta
gaggacgtgcatgttcatgttcgtgcttctttggagtgtaatactgacaggacaacttta
cgaactgattacttacctgttcttctgaagcaattaacagatcctctccgacaactggca
aaggatgttgctgttcagaaggtagtgaaactcatggatgcttattctttaagtcaggag
gactttgatacaattgtagaattatccaagtttcaggggcgtccaaatcccttagatggt
atacagcctgcagttaaagctgctctcactaaggcatacaagcaaggaagcagctcacgt
gttgtgagagcagcggatttgatcactctcccagggctgaagaagcctccaaagaagcgg
atagcagccatgttagagccagttgatgattcggtaccagaggagaatggagaaccattg
gcagatggcgaggaagaggactcatcagatgctgaagatgctgacgctactataattggt
gagaaaaagccccagctggatttgcagagtgacaaatctaaaggtattcaagtacagctg
aacttgaaaaatgctggagattcaacttcaaagaagactccaacaacagcaacaaaatca
agaggttcaggttctacagggagaggcgggcgaggctctggagctacaaagaggaagaga
taa
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