KEGG   Aristolochia californica: 137948781
Entry
137948781         CDS       T10486                                 
Name
(GenBank) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
acak  Aristolochia californica
Pathway
acak03030  DNA replication
acak03410  Base excision repair
acak03420  Nucleotide excision repair
acak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137948781
   03410 Base excision repair
    137948781
   03420 Nucleotide excision repair
    137948781
   03430 Mismatch repair
    137948781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acak03032]
    137948781
   03036 Chromosome and associated proteins [BR:acak03036]
    137948781
   03400 DNA repair and recombination proteins [BR:acak03400]
    137948781
DNA replication proteins [BR:acak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137948781
  DNA Replication Termination Factors
   ELG1-RFC complex
    137948781
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137948781
DNA repair and recombination proteins [BR:acak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137948781
  Check point factors
   HRAD17(Rad24)-RFC complex
    137948781
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase Rad17 nSTAND_NTPase5 AAA_lid_RFC1 Viral_helicase1 TniB AAA_16 RCF1-5-like_lid RuvB_N AAA_11 AAA_assoc_2 AAA_19 nSTAND3 AAA_28 ABC_tran AAA_25 DNAX_ATPase_lid AAA_7 AAA_30 AAA_5 AAA_18 AAA_24 MeaB IstB_IS21 NTPase_1 AAA_3 bpMoxR RNA_helicase
Other DBs
NCBI-GeneID: 137948781
NCBI-ProteinID: XP_068651051
LinkDB
Position
Unknown
AA seq 334 aa
MATTSSAPTFSTGFEVPWVEKYRPTKVADVVGNTDAVSRLQVIAKDGNMPNLILAGPPGT
GKTTSILALANELLGPNCKEAVLELNASDERGIDVVRNKIKMFAQKKVTLPPGKHKMIIL
DEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILG
RLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFINQESVFKVCDQPHP
LHVKKMVQNVLEGKFDDACAGLKQLYDLGYSPTDIITTVFRVIKNYDMPEYLKLEFLKET
GFAHMRICDGVGSLLQLCGLLAKLALVQETAKAV
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggctactacctcgtcagcaccgactttttccaccggcttcgaagttccttgggtggag
aaatacagaccaaccaaagtagccgatgttgttggcaacacagatgccgtttcccggctt
caagtcatcgccaaggacggaaacatgcctaatcttatcttggcaggtcctccaggaacc
gggaagacaaccagcattttggctcttgccaacgagctgcttggtccaaattgtaaggag
gcagttttagagctcaatgcatcagatgagaggggaatcgatgttgtaagaaacaagatt
aagatgtttgcccagaagaaggtgacacttccaccaggaaaacacaagatgataattttg
gatgaagcagatagcatgacatctggggcacaacaagctttgagacgtacaatggagata
tactcaaattctacacgatttgctcttgcctgcaatacctcttctaaaattattgagccc
attcagagtcgatgtgcacttgtccgtttttcaagattatcagatcaagagattcttggt
cgccttatggtggttgtggaagcagagaaggtcccctacgtgccagagggacttgaagcc
ataatcttcactgctgatggagatatgaggcaggctttgaacaatttgcaggccacttac
agtggattccgatttattaatcaagagagtgtcttcaaggtctgtgatcaaccccatccg
ctacatgtgaaaaaaatggtccagaatgttcttgaagggaagtttgatgatgcctgtgct
ggtctcaagcagctctatgaccttggttactctcctactgacataatcactactgttttc
cgtgtaataaaaaattacgacatgcccgagtatctaaagctagaattcttgaaggaaaca
ggatttgctcacatgagaatctgtgatggagttggatctcttcttcagttatgtggtctc
ctagcaaagcttgctcttgttcaagaaactgctaaagctgtgtaa

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