Aristolochia californica: 137948892
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Entry
137948892 CDS
T10486
Name
(GenBank) uncharacterized protein isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137948892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137948892
Spliceosome [BR:
acak03041
]
Complex C
Other components
Step II factors
137948892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD_LRWD1
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
137948892
NCBI-ProteinID:
XP_068651202
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDLLRSYQELSEKDENEEEAEKPQTLESQSSAGGGSSTTPLSSPDLSPVRISLPSKTSAP
KVDDTILALTVADANLQLRRPIDPAQHVVSFNPSYDQLWAPICGPTHPYAKDGIAQGMRN
HKLGFVEDTAIEPFQFDEQYNTFHKYGYAADPSASVGKNYIGDLEALEKNNAVSVYNIPQ
HDQKKRKLELKNKKKQEDEDEVTGADLDNPASEDWLQKNRKSPWAGKKEGLQTELTEEQK
KYAEEYSQKKADKDQNSGEKAEVTDKSTFHGKEETDYQGRSWIAPPKDAKATNDHCYIPK
RWVHTWSGHTKGVSAIRFFPKYGHLLLSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI
SFSNDGTRFLSAGYDKNIKLWDTETGKVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDK
KIVQWDMNTGEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE
PHMHSMPSISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSP
DGRFVMSGDGEGRCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGMIKYW
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatctccttcgaagctatcaggagctcagtgagaaagatgaaaatgaagaagaagct
gaaaagccccaaacccttgaatcccaatcttctgctggtggtggcagcagtacaactccc
ctatcctcccctgacttgtcacctgttcgaatctctcttccctccaaaacctctgctcca
aaagttgatgacactatacttgccctcactgtcgctgatgctaacctccagttacggaga
cccattgacccggctcagcatgtcgtctccttcaatccctcctatgaccagctctgggct
cctatttgtgggcccacccacccatatgccaaggatggcattgcccagggcatgcgcaac
cacaagctaggctttgtcgaggataccgccattgagccttttcaatttgacgaacagtat
aataccttccacaagtatggatatgctgctgacccctcggcttctgttggtaagaattat
attggcgatctcgaggctcttgagaaaaataacgctgtctctgtgtacaatattccccag
catgatcagaaaaagagaaagcttgaacttaaaaataagaaaaagcaggaggatgaagat
gaagtcacaggggctgaccttgataaccctgcctcagaggattggttgcagaagaaccgg
aagagcccttgggcaggaaagaaggaaggtctgcaaacagagttaactgaagagcagaag
aaatatgcagaggagtatagccaaaagaaagcagataaggaccagaacagtggagagaag
gctgaagtcactgataagagcactttccatggaaaggaagagacggactaccaggggaga
tcttggattgcaccaccaaaggatgccaaagctacaaatgaccattgctacatcccaaag
aggtgggtgcacacatggagtggccacacaaaaggggtatctgcaattcgttttttcccg
aaatatgggcatttacttctatcagctggaatggacacaaaggtcaaaatctgggatgtc
ttcaattctggaaagtgcatgcggacttacatgggtcactcaaaagcggttagagatatt
tccttctccaatgatggaactaggttcttaagtgcgggctacgataaaaatatcaagttg
tgggatactgaaacaggtaaagtgatctccacattctctactgggaagatcccttatgtg
gtcaaacttaaccctgatgaagataagcagaatattcttcttgctgggatgagtgacaag
aagattgttcagtgggacatgaacactggagagattacacaagagtatgatcagcatttg
ggtgcagttaatactatcacatttgttgataataacaggaggtttgttacttccagtgat
gataagtctcttcgggtgtgggaatttggcattcctgttgtaattaagtatataagtgaa
cctcatatgcattccatgccctcaatttctcttcaccccaattcaaattggttagctgca
cagagtttggataatcaaattctcatctatagcacaagggagaggtttcagctcaataaa
aagaagaggtttgctgggcacattgctgcagggtatgcttgccaagtgaatttttctcca
gatgggaggtttgtcatgtcaggagatggagagggaaggtgctggttttgggactggaag
agctgcaaagtatttagaacactgaagtgtcatgagggagtatgtatagggtgtgaatgg
catcctcttgaacagagtaaagttgcaacctgtggctgggatggcatgatcaaatactgg
gattaa
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