Aristolochia californica: 137949007
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Entry
137949007 CDS
T10486
Name
(GenBank) RNA polymerase sigma factor sigA-like isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137949007
Transcription machinery [BR:
acak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137949007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Cas9_a
LexA_DNA_bind
HTH_36
Motif
Other DBs
NCBI-GeneID:
137949007
NCBI-ProteinID:
XP_068651358
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MATAAVIGLSTGKRLLSSSFYPADLTEKLFSCHEYGLPQIPSAPTKSVILAKRTSNFGPT
FPVNRQSHSQYIKALKEHVDTSFAPSTAGSWSQSSDLLEAHDSDLEFSLQVLILLQKSML
EKQWALSFQQAGKMDISGATHKKLGITRSGTSARQRRTQVRRKCLNHNASVAVPSKEKQL
RSIVSPELLQNRLKGYVKGVVSDDLLSHTEVVCLSKNIKAGLHLEEHKSRLKEKLGCEPS
DEQIASSLRISRTELHSTVIACSLARERLAMSNVRLVMSIAQKYDNMGAEMADLIQGGLI
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPTHMHERLSLIRNAKMRL
EEKGITPSVDRIADALNMSQKKVRNAMEAVSKVFSLDRDAFPSLNGLPGETLHSYIADTN
LENSPWHGVDKWFLKDDVNKLLNTTLSERERVIVRLYYGLDNDCLTWEDISKQIGLSRER
VRQVGLVALEKLKHAARKRRLESMLMIMMKLRKF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagccgcagttattggactaagtacaggaaagaggcttttgagttcttcattt
tacccggctgaccttactgagaagctattttcttgccatgagtatggtttaccacaaatt
ccttcagctcctacaaagagtgttatacttgcaaaacggacaagcaattttggccccact
tttccagttaatagacagtcacactcccaatatataaaagcacttaaggaacatgtagat
acctcttttgctccttcaactgcagggtcttggtcccaaagttctgatctccttgaggca
cacgatagtgatcttgaattctcccttcaagttcttatactattacaaaaatctatgctg
gagaagcagtgggccctttcttttcaacaagcgggaaaaatggacatatcaggtgcaacc
cacaaaaaactaggaataactcgttctgggacttcagctagacagagaagaacacaagtc
aggaggaaatgtcttaatcacaatgcgtctgtggcagtgcccagtaaagagaagcaactg
agatctattgtcagtccagaactacttcagaatcggttgaaaggttatgttaaaggtgtt
gtaagtgatgacttactttcccatacggaagttgtatgcctatctaaaaacattaaagct
gggctgcacttggaggagcacaaatcaagattgaaggaaaaactaggatgtgagccctct
gatgagcagattgcttcttcattgaggatatctcgcactgaattacactcaacagtaatt
gcatgttctttggcaagggaaagattagcaatgagtaatgtgcgtcttgtcatgtcaatt
gcacaaaaatacgacaacatgggggctgaaatggctgacctcattcagggtgggttgatt
ggattactgcgtgggatagagaaatttgactcttcgaagggatttaaaatttcaacttat
gtatattggtggatccgccagggtgtttcaaaagcattgattgagaactccagaacacta
agattacctactcatatgcatgaaaggttaagcttaattcggaatgcaaagatgagactg
gaggagaaagggataacaccatctgttgatagaatcgcagatgctctgaacatgtcgcag
aaaaaagtcaggaatgccatggaggctgtcagtaaggtcttctcgcttgatagagatgcc
ttcccctcgctaaatggtcttccaggagaaactcttcatagttatattgcagacactaac
cttgaaaatagtccgtggcatggagtagataaatggtttctcaaggatgatgtaaacaaa
cttcttaatacaacactcagtgaacgtgaaagagttatagtacgcctttattatggcctg
gacaatgactgccttacgtgggaggacatcagcaaacagattggtttatcaagggaaagg
gttaggcaggttggactcgttgctctggagaaactaaagcatgctgcaagaaaaagacgg
ttggaatccatgctgatgattatgatgaagctgaggaagttctga
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