Aristolochia californica: 137949113
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Entry
137949113 CDS
T10486
Name
(GenBank) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137949113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137949113
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137949113
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137949113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
137949113
NCBI-ProteinID:
XP_068651488
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MPADEKKPVILIRRVWAQNVVSEFELIKSLLPRFHYVSMDTEFPGFVFQSPSVRERNHPQ
GRYQVLKLNVDALKLIQLGFTLCDADGNLPHLGTNCRYAWEFNFSDFDVSRSLHAPSAIS
MLKENGIDFERNRREGISSLHFADLMFSSGLVGNGGVHWVSFHGSYDFGYLVKILTQSSL
PELLTDFMELLTALFGSSLFDVKYIGSKMKLYGGLERLAKLLQVERSAGNAHQAGSDSLL
TCQTFLKMSRKFELEANSFAGIVYGLNEKYWAC
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacgagaagaagccggtcatcttgatccggcgggtgtgggctcaaaatgtc
gtctctgaatttgagctgatcaagtctctgcttcctcggttccactacgtctccatggac
accgagttccctgggtttgtttttcagtcgccctccgtccgtgaaagaaaccacccacaa
ggccgttaccaggtgctcaagttgaatgtagacgctttgaagctcattcagctcggattc
actctctgtgatgccgacggaaacctacctcatctgggtaccaactgccgttacgcctgg
gagttcaacttctccgactttgacgtctcccgcagtctccatgctcccagcgccatctcg
atgctgaaagagaatggcatcgattttgagcggaacaggagggaggggatttcttccctc
cacttcgctgatttgatgttctcctccgggcttgttggtaacggcggcgtgcattgggtc
agtttccacggctcctacgacttcggctatctcgtcaagattttgacgcagagcagctta
cctgaactcttgaccgacttcatggaattgttgactgctctctttgggtcgtcactgttc
gacgtgaagtatattggttccaaaatgaagctctacggcgggctagagcggctggcgaag
ctgctgcaggtggagcgctcagcgggcaatgcgcaccaggctggctcagacagtcttctc
acttgtcagacttttctcaagatgtcacggaagtttgagctggaggctaacagcttcgct
ggaatcgtttatgggttgaatgagaagtactgggcttgttga
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