Aristolochia californica: 137950105
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Entry
137950105 CDS
T10486
Name
(GenBank) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
acak Aristolochia californica
Pathway
acak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137950105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acak03400
]
137950105
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137950105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
137950105
NCBI-ProteinID:
XP_068652588
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MQRQKSILSFFKKPSQDGQNGGADSYSQMLHNRRPPSFPVNQQKHGEESVDPRAENLLPE
LMGTDTPPAKPQRQVLLLSSPVDNDAGARPFSNIMEKFRRKDEQGRFLERNQDKSSSFIC
SSDNELDGAQGVLAQGNSLSQTLTADGLKFDLSFELGASLDFVNITDDILGPDTPAMKPL
VPRLKRVQEDSCKYGEKVYCPLPDSNKRMKSFHNPGTEKKNDVKLSENMSSKFEWLSPSL
IKDANGRRPGDTLYDKKTLYIPPDALKKMSASQKQYWSTKCQYMDLVLFFKVGKFYELYE
VDAEIGQKELDWRMTYSGVGKCRQVGISESGIDDAVQKLLARGYKVGRIEQVETSGQAKA
RGAASVIQRKLVHVYTPSTAVNGTMGPDAVHLLALKEGNGLETGSTIYGFAFLDYASSKF
WVGSICDDASCVGLGALLLQVSPKEVIFEGRGLSAESQKALRKYALAGSIGVQLTPVIPG
TDFMDHISVRELIQTKGYFRGSSDSWASVCGDVDHNDLTLSALGALLAHLTRLMLDDVIC
NGDISPYQVYENCLCMDGQTLMNLEIFSNNADGGSSGTLYNYLDNCITSSGKRLLRNWIC
HPLKDIGQINHRLNVVEGFMKHSDVFLFMAQYLRRLPDLERLLGQVKASVGSSAILLLPL
VGERILKQRVKAFVSLVKGLRIGMDLLNIMQKEALQISSLSEVLNLPLLTGSNGLDEVLT
QLEVAVDSDFAPHKDYVVKESDAVTLAILVELFAGKVPQWSKIIYAISRIDVLRSFAVTA
NSSVGSMCRPVILSHDSNSEVSCHEHGGSFLKTKGLWHPYAVADSGGGLVPNDLYLGENA
NGHSPRALLLTGPNMGGKSTLLRASCLAVILSQLGCYVPSEMCILTPVDTVFTRIGATDK
IMTGESTFFIECMETASILQRATKNSLVVLDELGRGTSTFDGYAIAYAVFRHLIEKVHCR
LLFATHYHPLAKEFASYPHVDLQHMACAFKQNSGITSNRDQELVFLYRLSPGACPESYGL
QVALMAGVPELVVKAASKASQAMKVSLRENFRSSESRSQFSSLHEDWFKTLLSFSSITAN
PSLNEDALDTLLCLWHEIRGQSRAAL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgccagaaatccatactttccttttttaagaaaccatctcaagacggccaaaac
ggcggagcggattcttactctcagatgctccacaaccggcgtccaccgtcgtttccagtt
aatcaacagaagcacggtgaggaatccgtcgatccacgggcggaaaacctcttgccagaa
cttatgggcacagatacgccgccggctaagccgcaacgacaggtcttactgcttagttcc
ccggtcgacaatgacgctggagctcgtcctttctccaatataatggaaaaattcaggagg
aaagacgaacagggacgatttctcgaaaggaatcaagataaaagcagttcattcatttgt
tccagtgacaatgaacttgatggagcacaaggagtattagcacaaggcaactccttgagt
caaacactcactgctgatggcctcaaatttgatctcagctttgaattaggggcttctttg
gattttgtgaacatcactgatgacattctggggccagatactccagctatgaagcctctt
gtgcctcgtctgaagcgggttcaagaggacagttgcaaatatggtgaaaaagtttactgt
cctttacctgattctaataagagaatgaagtcattccacaatccagggacagagaaaaag
aatgacgtaaagttatctgaaaatatgagcagtaagtttgaatggcttagcccttctctc
ataaaagatgcaaatggaagaaggcctggtgatacactttatgacaaaaagactctgtac
ataccacctgatgctttgaagaaaatgtcggcatctcaaaaacagtactggagcactaaa
tgtcagtatatggatttggtgctcttctttaaagtgggaaagttttatgagctgtatgaa
gtggatgcagaaattggccaaaaggaacttgattggagaatgacatacagtggtgttggt
aaatgtagacaggttggtatttctgaaagtggcattgatgatgctgttcaaaagttacta
gctcgtgggtacaaagttggacgaatagaacaggttgaaacatcaggtcaagcgaaagcc
agaggtgctgcgtcagtgattcaaagaaaacttgttcatgtttataccccttcaactgca
gttaatggaactatggggcctgatgctgttcaccttcttgctttgaaagagggaaatgga
ttggagactggttcaactatatatggatttgcttttttagattatgcttcctcaaaattc
tgggttggttctatctgtgatgatgcttcctgtgtgggtttgggagcactgctgttgcaa
gtctcgccgaaagaagttatctttgaaggcagagggctctcagctgaatctcaaaaggcc
ctaaggaaatatgctttggcaggctccattggtgtgcagttaactcctgtgattccagga
acagatttcatggaccatatcagtgttagagaactgatacaaactaaaggatactttcgt
ggttcttctgattcttgggcttccgtttgtggtgatgttgatcacaatgatcttacacta
tctgctcttggtgcgcttcttgctcacttgactaggttgatgctagatgatgttatttgc
aatggggacatttcaccttatcaagtatatgaaaattgcttatgcatggatggtcagacc
ctcatgaatcttgagattttcagcaataatgctgatggaggttcatcaggcaccctctat
aattatcttgacaactgcataacttcatctggtaaacgacttttgagaaattggatctgc
cacccactgaaagatattggacaaatcaatcacaggcttaatgttgttgagggattcatg
aaacattcagatgtatttctcttcatggcacagtatttgaggaggctccctgatcttgaa
agactattaggacaggtcaaggctagtgtggggtcgtcagctatactgttactaccccta
gttggtgaaagaatattgaaacaacgagtcaaagcatttgtctctcttgttaaaggacta
cggattggtatggacttgttaaacattatgcaaaaagaagcccttcagatttcatcattg
tctgaagtactaaaccttcctttgctgactggtagcaatgggctcgatgaagttcttact
caactggaagtagcagtggatagtgactttgccccacacaaggactatgttgtgaaagaa
tcagatgctgtgacattagccattcttgttgagttgtttgctggaaaagttcctcaatgg
tctaaaatcatctatgcgattagccgtattgatgtgctacggtcatttgctgttactgca
aattcttcagtggggtcaatgtgtagacctgttattttgtcacatgattcaaattctgaa
gtttcttgccatgagcatggaggatctttccttaaaaccaaagggctttggcacccatat
gctgttgctgatagtgggggtggacttgttccaaatgatctgtatcttggtgaaaatgca
aatgggcacagccctcgtgctttattgttgacaggtccaaatatgggtgggaagtcaaca
cttttgcgtgcttcatgcttggctgttatactatctcagttgggatgctatgtaccttca
gaaatgtgtattttgacacctgtggatactgttttcactcgtattggtgcaactgacaaa
atcatgactggagagagtacattttttatagagtgcatggagactgcatcgattcttcag
agagctacgaagaattctctggtagtgcttgatgaacttggtcgaggaacaagcacattt
gatggatatgccattgcttatgccgtgtttcggcatctaattgaaaaagttcactgccgc
ttgctgtttgctactcactatcatcctttggcaaaagaatttgcttcttatcctcatgta
gacctccagcacatggcatgtgcattcaaacagaactctgggatcacttctaaccgtgac
caggaacttgtttttctctatcgactttcaccaggagcctgcccagagagctatggtctt
caggtggctctcatggctggcgtaccggaattggtggtgaaggctgcatcaaaagccagt
caagcgatgaaagtttcactcagagaaaacttcaggtcaagtgagagtaggtcacagttt
tctagcctccatgaggattggttcaagaccttactttccttttcaagcatcaccgctaac
ccttctttgaacgaagatgcattggatacattactttgtctttggcatgagatcagaggt
caatctcgagcagcgttataa
DBGET
integrated database retrieval system
