Aristolochia californica: 137950349
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Entry
137950349 CDS
T10486
Name
(GenBank) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
acak Aristolochia californica
Brite
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
90S particles
Other 90S particles
137950349
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137950349
NCBI-ProteinID:
XP_068652857
LinkDB
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Position
Unknown
AA seq
1943 aa
AA seq
DB search
MVAPSSKSRKGKTIDGLKPKKTAMKSKKRKHTDEPENGENKLIAARKSDLMPLCIEDDVP
DFPRGGGSILTRQEEEEARAEAEAEFNAEDRELKKKRKASKKSWTDEDDLGSLFGGGFIG
KLPRLANKITLKNISPGMKLWGMVVEVNSKDLVISLPGGLRGFVRAEEASDLFSENGVKD
AESNFLCSIFHVGQLVPSIVLQVDEDNKQTGGSKRIRLSLRLALLHKALTLDSVQNGMVL
SAYIKSVEDHGYILLFGSSSFSGFLPNNSKEGSCEMHIGQLVHGVVRSIDKARGVVHLNC
DPDLVANSVIKDLKGLSIDLLVPGMMVTARVQAQLYNGLMLSFLTYFTGTVDIFHLQNYF
PNATWRDSYSENKRVTARILFIDPSTRAIGLSMNSHLLHYKAPPFHVKTGEIFDTARVVR
VDRGFGLLLEIPSSPLATPGYVMLHDVADEEVRKLDKKFKEGKTVRLRILGFKHMEGIAT
GTLKATSFEGSVFTHSDVKPGMHVKAKIISVDHKGALVQLSDGVKALCPVSHMSEFEFPK
PSAKFKVGAQLLFRVLGCKSKRITVTHKKTLVRSKLDILASYADATDGFITHGWIEKLEK
HGCFVRFYSGVKGFAHRSELGLDPGSDPSSMFHVGQVVKCRVISVSPSSRKISLSFITST
KRACGNGKVPKVGSFVSGTVARLTPSAVIVQVNAEGYVKGAIYNEHLADHLGHSELMKSL
LKMGYEFDQLLVLDVEGDSLILSAKYSLINSADQLPHEVEQVHPHSVIHGYICNMIESGY
FIRFLGRLTGFAPKDKAVDDQKADASEAFYIGQSVRSHVLSVDGEKGRIKLALKQSSCFS
TDASFINGYFVVEEKIAKLKILDSSTPDLRWVEKFKVGSLVEGEIQEIKEFGVVVSFKDQ
SDVIGFITHYQLNGKVGTGSIVQATVLDVSKLECIVDLSLKPEFVSESKDAKGKKRKRGA
IAGLEVHQTVHATVEIVKENYLVLSLPEYGHAIGYASLYDYNTQKLPHKHFVNGQSVLVT
VEDLPSHSPTGKLLLLLKTLSEVADSSSSKRAKKKSSYHVGSVVQAEITHVKPLELWVKF
GIGFYGRVHITEVADGFMEKPFTELKVGQMLTARIIAKRLDVGKTKKRTEWELSIKPSML
AETGETDNLAMDDRFRFSVGEVVSGYVRKVDSEWVWLIVSRNVSAHLFLLDSSCEPSELQ
MFQKKFSVGQVVSGYIMSINQEKRLLRIMLCPPSARQNTHLEVESVKLEASGTTVTNDNK
NLHILQGDLIGGRISKIFPGVGGLVVQIGPHLYGKVHFTELKDGWVSDPLEGYHEGDFVK
CKVLEISRSFKGTTHVELSLRAALGELQFTTSETPSNDMHSYHKRYEEIEELHPSMEVQG
YVKNVMPKGCFIMLSRKIEARILLSNLSDGFIVNLEQEFPVGKLVKGKVLSVDPLSKRVE
VTLKKTTAVRESKLQLGDLCDLHIGDVISGTIRRVESYGLFITIDHTNVVGLCHISELSD
NQIDHIEVKYKAGERVVAKILKVDEERLRVSLGMKNSYMEDDPSTANHELDEPCKGNNTI
DSECGPLQACNFDNAREASFDQRNSSFLVLAQLESRASIPPLTVPLDDLEGSDSENVVTQ
TRDETIENNSRSEKNLRKQKKKEKEKREMEIRAAEDRLKEKYNKPETADDYEKLVRSSPN
NSFVWIQYMDFMLSLADVERARSIAERALTTINFREEGEKLNIWVAYLNLEKMHGDPPEE
AVVKIFQRALQYCDQKKIHLALLELYQRTEQHKLADELLEKMVKKFKNSCKVWLRRVQSL
LKQEKDGVQSIVKRALLSLPRHKHIKFISHTAILEFRCGVPDRGRSMFEGVLKEYPKRTD
LWIVYLDQEICQLKKKKQVHDKQEVLQEDGEIVRALFERATCLSLPPKKMKAIFKKFLEF
EKSFGDEERVEFVKKKALEYVEG
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggtagctccttccagtaaatcccggaaaggcaaaaccatagacggactgaaacctaag
aaaaccgcgatgaaatctaaaaagaggaagcacacggacgaaccagaaaatggggaaaac
aaactgatagccgctcgtaagtcagacctcatgcctttgtgtatcgaagacgatgtgccg
gattttccacgaggaggtggaagcattttgactcggcaagaggaggaggaagctcgcgca
gaagcagaagcagagttcaacgcggaagacagagagttgaagaagaagagaaaggcatcg
aagaagtcgtggacggacgaagacgatttgggttccctatttggtggcggcttcataggg
aagctgcctagactggccaataagattacattaaagaatatatctcctggtatgaagcta
tggggaatggtcgtggaagtgaactcaaaagaccttgtaattagtctcccaggagggctg
cgaggatttgttcgtgcagaagaagcatctgatcttttctcagagaatggtgtcaaggac
gctgagagtaatttcttgtgtagcatttttcacgttgggcagctcgtgcctagcatagtg
ttacaagtagatgaggacaataagcaaactggaggaagcaaaagaattcggctttcactt
cgtcttgccttgttgcataaagctctcactttagactctgttcaaaatgggatggtcctc
tcagcgtatattaaaagtgttgaagatcatgggtacattcttcttttcggatcatcttct
ttttctggttttctgccaaacaatagcaaagaaggtagttgtgagatgcatattggccag
ttagtccatggggtcgtgagaagtattgataaggcaagaggagttgttcatcttaattgt
gatccggatcttgtggccaattctgtgattaaggatcttaagggcttgtcaattgatttg
ctagttcctggcatgatggttactgctcgtgttcaagcacagctttataatgggcttatg
ttatcattccttacttatttcactggcactgttgatatctttcatctacagaattatttc
ccaaatgcaacttggagggacagctactctgaaaataaaagggtaactgctcggatattg
tttattgacccttcaactagagccattggcttgtccatgaattcccaccttttacattac
aaagctcctccttttcatgttaaaactggcgagatctttgatactgctcgtgttgtcaga
gttgatagagggtttggacttctgcttgaaatcccctcatctccacttgcaactcctggt
tatgttatgttacatgatgtggctgatgaagaagttcgaaagctggataaaaagtttaag
gagggaaaaactgttcgtcttcgtattcttggctttaaacatatggaaggaatagcaact
ggaacattaaaggctacttcgtttgaagggtctgttttcacacattcagatgtcaagcct
ggtatgcatgtgaaggctaagataatatctgtggaccacaagggcgcccttgtgcagtta
tctgatggtgtaaaagccctttgtcctgtttcccacatgtcagagtttgagtttccaaag
ccttctgcaaaattcaaggttggagcccagttgctgtttcgtgttctgggttgcaaatcc
aaacgaataacggttacacacaagaaaacacttgtgagatcaaagcttgatattcttgct
tcatatgcagatgctactgacgggttcattacacatggatggattgaaaaattagaaaag
catggttgttttgtgagattttatagtggagtaaagggatttgcccacaggagcgaactg
gggctggatccaggaagtgacccaagttcaatgtttcatgttggacaagttgtcaagtgc
agagtgataagtgtttctccttcttcacgaaagattagtcttagttttatcacatctacc
aaaagggcttgtggtaatggcaaggtcccaaaggttggtagttttgtttcaggcactgtt
gcacggttgaccccttctgctgtaatagtacaggtgaatgcggaaggttatgttaaagga
gcaatttataacgagcatttagcagaccatctaggccattctgagttgatgaaatctttg
ttgaaaatgggatatgagtttgatcagcttttggtgctagatgttgagggagatagttta
attctttcagctaaatactctcttataaactctgctgaccagcttccacatgaagttgag
caagttcatcctcattcagtgatccatggttacatctgcaatatgattgaaagtggatac
ttcattcgctttctggggcgcttgacaggatttgctcccaaagataaagctgtagatgac
caaaaagcagatgcttctgaagctttttacattgggcaatctgtccgaagtcatgttctc
agtgtcgatggtgaaaaaggtcggataaagcttgccctgaagcaatcatcttgtttctca
actgatgcatcatttattaatggatactttgttgtggaggagaagattgcaaagctgaaa
atattagactccagcactcctgatttgagatgggttgagaaattcaaggttggtagtttg
gttgagggagagattcaggagataaaagagtttggtgttgttgtcagcttcaaggatcag
agtgatgtcataggctttatcacacattaccagttaaatgggaaggtgggaacagggtct
attgttcaagctacggttcttgatgtttcaaagttggaatgcattgtggatttatctcta
aagccagaatttgtcagtgaaagcaaagatgcaaagggaaagaaacgcaagagaggagca
attgctgggttagaggtgcaccagacagtccatgcaactgtggagattgtgaaagagaat
tatctggtgctttcactaccagagtatggtcatgccataggatatgcatctctttatgac
tataacactcagaaacttcctcacaaacactttgtgaacggccaaagtgttcttgttact
gttgaagatcttccaagtcactcacctactggaaaacttcttcttctcctcaaaacttta
agtgaggtcgcagactcatcaagttcgaaaagagcaaagaaaaagtctagctaccatgtg
ggatcagttgttcaggctgagatcacacacgtaaagccacttgaattgtgggtgaagttt
ggcattggtttttatggcagagtgcatattacagaggttgccgatggtttcatggaaaaa
ccatttactgaattgaaagttggacagatgcttacagcaaggataattgctaagcgtctt
gatgtggggaagactaagaaaagaactgagtgggagctatccataaaaccttccatgctt
gcagaaaccggggaaacagataatttggccatggatgaccgttttaggttctcagttgga
gaagttgtcagtggatatgtgaggaaggtggatagtgaatgggtgtggttgattgtatct
cgtaatgttagcgctcatctatttctgcttgatagttcttgtgaacccagtgaactccaa
atgttccagaagaagttttctgttggccaagttgtatctggttatattatgagtattaac
caggagaaaaggcttttaaggataatgttgtgcccgccatcagctcgacagaacacacac
cttgaggttgaatcagtaaaacttgaagcttcaggaactactgttacaaatgataacaaa
aaccttcatatccttcaaggtgatttgattggtggcagaataagtaaaatatttcctggt
gtggggggattggttgtgcagattgggccccacctttatggtaaggtccatttcactgaa
cttaaggacggatgggtgtctgatcctctagaaggatatcatgaaggggactttgtaaaa
tgcaaggtgcttgaaatcagtcgttcatttaagggtacgacacatgttgaattgtccctg
cgagctgctttaggagaattacaatttactacatcagaaacacctagcaatgatatgcat
tcatatcataaacgatatgaggagatcgaggagctccaccctagtatggaagttcagggt
tatgtgaagaatgtaatgcccaaaggatgttttattatgctttcacggaaaattgaggcc
agaattcttctatcaaacttgtctgatggtttcattgtaaatcttgaacaagaattccct
gttggaaaacttgtaaagggaaaagtgctatctgttgatcctttgtctaagagagttgaa
gtcactctgaagaaaaccactgcagtccgggagtcgaagttgcaacttggtgatttatgt
gacctacatataggagatgttatcagtggcaccattagacgggttgagtcatatggctta
tttatcactatcgaccataccaatgtggttggtttatgccatatttcagagctttctgac
aaccaaattgaccatatcgaagttaaatataaagcaggagagagagttgttgcaaaaatc
ttgaaggtggatgaggaacggctgcgggtttctcttggaatgaagaattcctacatggaa
gatgatccgtctactgcaaaccatgaactggatgaaccttgtaaaggaaataataccatt
gattcggagtgtggtccacttcaggcttgtaactttgataatgctagagaggcatctttt
gaccagaggaattccagtttcctggtgcttgcacaactggaatcaagggcatctattcca
cctcttacagttcctctagatgatctggagggttctgattctgaaaatgtagttactcag
acaagagatgagaccattgagaacaacagccgttctgagaagaatctcaggaagcagaag
aaaaaagaaaaagaaaagagagagatggaaattcgagctgctgaagatagattgaaggag
aaatataataaacctgagacagctgatgattatgaaaagttggtcagaagctcaccaaat
aatagttttgtctggattcagtatatggattttatgttgtctttggctgatgttgagagg
gctcgttcaattgctgaaagagctttgacaaccataaacttccgagaagagggtgaaaag
ttgaatatttgggttgcatatttgaacttggaaaagatgcacggagatccacctgaggag
gctgttgttaagatattccagagagctctgcagtattgtgaccaaaagaagatacacttg
gctcttttggagctgtatcaacggactgagcaacacaagctggctgatgaacttttggaa
aaaatggtgaagaaattcaagaactcgtgcaaggtttggttaaggcgtgtgcagagcctc
ttgaagcaagagaaagatggagttcagtcaattgtaaagcgagctcttcttagccttcca
cgtcataagcatatcaagttcatctcacacactgcaatacttgaattcagatgtggtgtg
cctgacagagggagatctatgtttgaaggggttctgaaagaatatcctaagagaacagat
ttgtggatagtttatcttgatcaggagatttgccaattgaagaagaaaaagcaggtacat
gataaacaagaggttctgcaggaagatggtgagatagtacgtgccttattcgagagggca
acttgcttaagtcttcctcccaaaaagatgaaggctatatttaagaagttcctcgagttt
gaaaaatctttcggagatgaagagcgggtagaatttgtcaagaagaaggcacttgagtac
gtcgaaggttga
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