Aristolochia californica: 137950353
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Entry
137950353 CDS
T10486
Name
(GenBank) uncharacterized protein isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137950353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137950353
NCBI-ProteinID:
XP_068652862
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Position
Unknown
AA seq
849 aa
AA seq
DB search
MDSSSSGATGREASLGDEDGGGHISVTASLARDAALLFQAHRFSECYDVLKQLLQKKEDD
PKILHNIAITEYYRDGCSDHRKILDVLNKVKKRSEDLSRASGEQGEVATTPGGGVITGPK
GSNATSHHFSTASGSSFTYTDEYDMSITTLNIAVVYFHLHDYAKALSILEPSYQNIAPID
ETTALHLCLLLLDVALASKDASKAADVIQYLEKAFGVGYMIGQVDSGNAIQHQSSNQATK
TSASPANLLVPDASNTDSISTASSSENQLTRILSDEGLEYEALLSKLDSGGSNMARPCIS
SQNALAERPGPAVDLKHKLHLYKVRLLLLTRNLKSTKREVKLAMNIARGRDSSTALLLKS
QLEYARGNYRKAIKLLENSSNRTEAGMRSMFNNNFGCIYHQMRKHNTATLFFSKALASSS
ALRSEKPLKLSNLSQDKSLLIVYNCGVQYLACGKPLVAARCFHKAGLVFYNRPLLWLRLA
ECCLVALENGLLKSEGMAATDVVTLNVVGKGKWRQEVVENVSSRSRHLGHVQEDGLICSD
HGQQRLSLPYARQCLLNALHLLNGLEMKSTFGLISESELSQAGAESLKSSNHKNVHGDSK
GSSNIAMSSGLASANGDTKEPKGNVDPNTTLQSSVTAFEELCRKENHMIKQAVLADLAYI
ELSLENPLKALSMARALLQVQDCSKIYTFLANVYAAEALCLLNRSKEAADLLSVYVSGSA
NVELPYSEEDMEKWRIAKLGGVTDGEEMNGTTTGLATPKDEYSHGVTFLKPEESLGILQV
NLAAICAMQGDMELARQFVVRALSVMPNNPVALLGAAYVDLMQGQTKEALVKLKECSLVR
FCPSDVTAH
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcgtcatcgggagcgacaggcagagaggcatctttaggtgacgaggatggc
ggtggccacatctccgttacagcctccctcgccagggatgccgcccttctctttcaggct
caccggttctcggaatgctacgatgtcttgaaacagttattacaaaagaaggaagatgat
ccgaagattcttcataatattgctatcaccgagtactatcgtgatggttgctcagatcac
aggaagattcttgatgtgcttaataaggttaagaagagaagtgaggacctgtctcgtgca
tccggggagcagggggaggttgctaccactcctggaggcggtgttattacagggcctaaa
gggagcaatgcaacatcacatcatttctccactgcaagtggttcaagttttacttacacg
gatgaatatgacatgtctattacaacattaaatatagcagtcgtatatttccatcttcat
gattatgcaaaggcattatcaattttagagccttcatatcaaaatattgcgccaatagat
gagacaacagctctacatctttgccttctcttattggatgttgcattagcttccaaagat
gcatcaaaagctgctgatgtcatccagtatcttgaaaaagcttttggtgttggatacatg
atcggtcaagtagatagtggaaatgctattcaacatcaatcatcaaatcaagctacaaaa
acttcagcatcacctgctaatttacttgttccagacgcctcaaatactgattcaatctct
actgcgagtagttcagagaaccaattgacaagaattctatcagacgagggtcttgagtat
gaagcccttctgtctaaattggatagtggtggatcaaacatggcaagaccgtgcatttct
tcccaaaatgcgcttgctgaacgcccaggtcctgcagttgacctgaagcacaagctccac
ctctacaaggtccgtcttctgcttctcacaaggaacctgaagtccacaaagcgtgaagta
aagctagccatgaacattgcacgaggacgagattcctccacagcattgcttttgaaatcc
caacttgagtatgctcgtgggaattaccggaaagctataaagctcttggagaattctagt
aacaggacagaggcagggatgcgcagtatgttcaacaataactttgggtgtatataccac
cagatgaggaaacataatactgcaactctttttttctctaaggctctagcaagcagctct
gcactgcgttctgagaagccactgaagctatctaatctctctcaggataagtccctccta
attgtgtacaactgtggtgtacagtatttggcctgtgggaagccactagttgctgcccga
tgtttccacaaggctggtttggttttttacaatcggcctcttctgtggcttcggttggct
gagtgttgtttagtagcactagaaaacggtctcctgaaatctgagggaatggctgccact
gatgtggttactcttaatgttgttggaaagggaaagtggaggcaagaagtagtggaaaat
gtgagttcaaggagtagacatcttggtcatgtgcaagaagacggtttgatatgttcagat
catggtcaacaacgtctctcattgccctatgctcgacagtgtcttctgaatgctttgcat
cttttgaatggtcttgagatgaaatctacttttggtttgatttccgaaagcgagttgagc
caagcaggagcagaatcacttaagagttcaaatcacaagaatgtacatggtgattcaaag
ggttcaagtaatattgcgatgagctctgggctagcaagtgcaaatggagatacaaaagag
cctaaaggaaatgtagacccaaacaccacattacagagctcagttactgcattcgaggag
ctgtgcagaaaggaaaaccatatgataaagcaggctgttctggcagatttggcatatatt
gagctcagcctggagaatcctttgaaagccttgtcaatggcaagagcactcctgcaggtt
caagactgttccaaaatatacacatttctggctaatgtatacgcagctgaggccctttgt
ttacttaaccggtccaaagaagctgctgacctgttgtcagtctatgtttcaggcagtgcc
aatgtggaactgccttacagtgaagaagatatggagaaatggagaattgcaaagcttgga
ggagtaacagatggtgaggagatgaatgggactaccacaggccttgcaaccccaaaggat
gagtattctcatggtgttacattcctcaagccagaagaatcactaggaattcttcaggta
aatcttgctgcaatctgtgccatgcagggtgacatggagctggcccggcagtttgtagta
cgggccctgtccgtaatgcctaataatccagtagctctacttggagctgcttatgttgac
cttatgcaagggcaaaccaaagaagctcttgtgaagttgaaagagtgtagtcttgttaga
ttctgtcctagtgatgtaacagcacactaa
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