Aristolochia californica: 137950437
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Entry
137950437 CDS
T10486
Name
(GenBank) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137950437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137950437
Spliceosome [BR:
acak03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137950437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137950437
NCBI-ProteinID:
XP_068652998
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKLFTMKLTVKQMHGLLKHLDSPYIRAVGFLYLRYAGDPKTLWSWFEPYVK
DDEEFSPGSNSRMTTMGVYVRDLLLGQYYFDTLFPRIPVPIMRQIVASLEQMKLPSKHSG
VTGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPHERNSSEDP
KRSPDKDKYRDRDRDRDRDKVRDRESNRDRRHDRHGDRDRDSHHCRHSERDRKDFDRGSR
DYDSHRRSSSHRSRSRSRSRSRSHSRSLQVRSSPLGDGGNKEKASLSSDLAKLKDMYGDP
SDSKGGNAVERGPRDSRDEEVIRLGGASWR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagatacaaacttctgggaaacctatagattctttgttagagaaggtcctgtgtatg
aacattctttcttctgattactttaaggagctttacagattgaagacttaccatgaagtc
attgatgagatctataatcaagtggatcatgtagagccctggatgactggaaactgtaga
ggcccttcaactgcattctgtcttctttacaaattgtttacaatgaaacttactgtcaag
cagatgcatgggcttctgaagcatctagactcgccttatattcgagctgttggttttctc
tacttacgatatgctggggatcctaaaacattatggagctggtttgagccttatgttaaa
gatgacgaggaattctctcctggctcgaatagtcggatgacaacaatgggagtctatgtc
cgtgatctgcttcttggacagtactattttgatactcttttccctcgtatccctgttcca
ataatgcgccagattgttgccagccttgagcagatgaagctcccctccaaacattctggt
gtcacgggagaatcaacccgtcatggatctgatgatactgctcgtcggccgccttctgtt
aaagctgctttatcagtttcttttggtcagagagcacctcatcgagcatcaacacgagat
tcctcaccagtgcgcaggacactgccaccacctcatgaacgaaacagtagtgaagatcca
aaaagatcccctgataaggataaatacagggacagggacagggacagggacagggacaag
gtccgggatagggaaagtaaccgagataggaggcatgaccgacatggagaccgggataga
gattctcaccattgcagacactcagagagagacaggaaggactttgataggggcagcagg
gattatgatagccacagaagatccagttctcatcgaagtaggagtagaagccgaagccga
agccggagccatagccgaagcttgcaggttcgttccagcccattaggtgacggtggcaac
aaggaaaaggcttccttatcaagtgatttggccaagttaaaagatatgtatggtgatccg
agtgatagcaagggtggcaatgcagtggagaggggtcctagggatagtagggacgaagag
gtgattagactcggtggggcttcttggagatag
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