Aristolochia californica: 137951367
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Entry
137951367 CDS
T10486
Name
(GenBank) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
acak Aristolochia californica
Pathway
acak03030
DNA replication
acak03420
Nucleotide excision repair
acak03430
Mismatch repair
acak03440
Homologous recombination
acak03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137951367
03420 Nucleotide excision repair
137951367
03430 Mismatch repair
137951367
03440 Homologous recombination
137951367
03460 Fanconi anemia pathway
137951367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acak03000
]
137951367
03032 DNA replication proteins [BR:
acak03032
]
137951367
03400 DNA repair and recombination proteins [BR:
acak03400
]
137951367
Transcription factors [BR:
acak03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137951367
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137951367
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137951367
MMR (mismatch excision repair)
137951367
DSBR (double strand breaks repair)
HR (homologous recombination)
137951367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RMI1_C
Big_10
Motif
Other DBs
NCBI-GeneID:
137951367
NCBI-ProteinID:
XP_068654082
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAKSVTRGAISSFLSNPSPDSSKETPDIVVQVVDLKPIGNSTTRFTFLASDGQRKLKAML
PTNFSSEIHAGKFQNLGLIRILDYTCNAIPNQTEKALIITKCEVVSPALETEIVSEVKNE
SGIILKPKQEVFAKSAAQIVHEQHGNSAPAARMALTRRVHPLVSLNPYQGSWTIKVCLTN
KGNLRTYKNAKGEGHVFNVELTDEDGTQIQATMFNNAATKFYPKFELGKMYYISKGSLRV
ANKQFKTVQNDYEMNLNENSEVEEVVGEGVFVPETKFNFIQIEDLGSYVNGREFVDIIGV
LQNVSPTTSIRRKINNETIPKRDITVADDSGKTVVVSLWNDLATTVGQGLLDMVESAPIV
AIKSLKVGDFQGVSLSTLSRSTVQINPEIPEAKKLRSWYESEGKGTLMEAVGSGINSVTK
SGARSFYSDRVSISHITSSPSLGEEKPAFFSLKAYVSFIKPDQKMWYRACKLCNKKVTEA
LGSGYWCEGCQKNDAESSLRYILVVKISDPTGEAWVSVFNEQAEKIIGCTADELERMKSE
TEDGKLFQQKLKEAKWVPHLFRVSVAQHEYNNEKRQRITLRAIGPVDWSAESRYLLEEIS
KVTIS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcagtgactcgtggagcgatctcttcttttctctcgaacccgtcgccggat
tcgtccaaggaaactccggacattgtcgttcaagtcgtggatcttaagcctatagggaac
agtaccacccgtttcacatttttggccagcgatgggcagagaaagctgaaggcgatgctt
ccaaccaacttttcatctgaaatccatgccggaaaatttcaaaatcttgggcttatccga
atccttgattacacctgcaatgccatcccaaaccagactgaaaaagctctaattatcaca
aagtgtgaggtggtttctcccgcactagagacggagatagtgtctgaagttaaaaatgag
tcaggaataattttgaagccaaaacaagaagtatttgcaaaatctgctgctcagattgtg
cacgaacaacatggcaattctgctcctgctgcacgaatggccttgacaagaagagttcac
ccacttgtctccttaaacccttatcaaggcagttggaccattaaggtttgcctcaccaat
aagggtaacctgcgtacttacaagaatgcaaaaggggaaggtcacgtcttcaatgtggaa
ttgacagatgaagatggtacccagatacaggcgaccatgttcaacaatgccgctactaaa
ttctacccaaaatttgaactaggaaagatgtattacatctccaaaggctctcttcgtgtg
gccaacaagcagttcaaaactgtccaaaatgattatgagatgaatttaaatgaaaattct
gaagttgaagaggtggttggtgaaggagtctttgttccagaaactaaatttaattttata
caaattgaggacttgggatcatacgttaatgggcgggaatttgtggatattattggagtt
ctccagaatgtctcacctacaacgagtatacgaaggaagatcaacaatgaaactattcca
aagcgtgatatcactgttgcagacgactcaggaaagactgttgtggtgtctctgtggaat
gatcttgcaactactgtaggacaggggttactagatatggttgaaagtgctcctattgtg
gctattaagtctcttaaagtaggagattttcaaggagtatctttgtctactttaagcaga
agcaccgtgcagataaatccagaaatacctgaagcgaagaagcttagatcctggtatgaa
tctgagggtaaagggactttgatggaggctgttggatctggcataaattctgtgacaaag
agtggcgcaagatccttctattctgatcgcgtgtccatctctcacatcactagtagccct
tccttaggtgaagagaagcctgcatttttcagtttaaaggcttatgtaagcttcatcaag
cctgaccagaaaatgtggtaccgtgcttgtaaactttgtaacaagaaagttactgaagcc
cttggatctgggtattggtgtgaaggatgccagaagaacgatgcagagagcagcctgaga
tatatattggttgtaaagatatcagacccaactggtgaggcatgggtttctgtcttcaat
gagcaggctgagaaaatcattggttgcactgcagatgagcttgagagaatgaaatcagag
actgaggatgggaagttgttccagcaaaagcttaaagaagcgaagtgggttcctcatctg
tttcgtgtaagcgttgctcagcatgagtacaataatgagaaaaggcaaagaatcacatta
agagcaataggacctgttgattggtcagctgaatcaagatatctgttggaagagatttcg
aaggtgacaatttcttga
DBGET
integrated database retrieval system
