KEGG   Aristolochia californica: 137951503
Entry
137951503         CDS       T10486                                 
Name
(GenBank) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
acak  Aristolochia californica
Pathway
acak03082  ATP-dependent chromatin remodeling
acak03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137951503
   03083 Polycomb repressive complex
    137951503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acak03036]
    137951503
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     137951503
  Histone modification proteins
   HAT complexes
    HATB complex
     137951503
   HDAC complexes
    Sin3A-HDAC complex
     137951503
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     137951503
    PRC2.2
     137951503
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     137951503
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137951503
  Chromatin remodeling factors
   NuRD complex
    137951503
   NuRF complex
    137951503
   NuRF complex (fruit fly)
    137951503
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st WD40_RFWD3 Beta-prop_WDR75_1st EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_RIG_1st Beta-prop_HPS5 NBCH_WD40 MIOS_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 137951503
NCBI-ProteinID: XP_068654298
LinkDB
Position
Unknown
AA seq 423 aa
MTKDEEEFRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAESDGRQYDDERGEIGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTISAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSLFKQGHLLSGSDDAQICLWDINGTPKNKTLEAQQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDHYLLIWDLRSSPANKPIQSVVAHQGEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINTALHTFDCHKEEVFQIGWSPKNETILASCCLGRRLMVWDLSRIDQEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDVPGDDS
KAP
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaccaaggacgaggaagaattccgaggagaaatcgaggagcgcctcatcaacgaagag
tacaagatatggaagaaaaacacaccttttttgtacgatctcgtcatcacccatgcactt
gagtggccttctctcactgtgcaatggctcccggacagggaggagccgccgggtaaagat
tactccgtgcagaagatgatattggggactcacacgtcggagaacgagcccaattatctg
atgcttgcacaagtacagctgcctctggaagatgcggagagtgatgggaggcagtatgat
gatgaaaggggcgagattggagggtttggctgcgcaaatgggaaggtgcaaataattcaa
caaataaatcatgatggagaggtcaaccgagctcgctatatgcctcaaaatccatttatc
attgctacaaagactattagtgcagaagtgtatgtctttgattatagcaaacatccatct
aagcctcctctagatggtgcatgcagtcctgacttgaggttaagaggccataacactgaa
ggttatggcttatcttggagtctcttcaagcagggccatctgctgagtggatctgatgat
gctcagatatgtttatgggacattaatggtactcctaaaaacaagactcttgaggctcaa
cagatttttaaggttcatgaaggtgttgtagaggatgttgcttggcatttaaggcatgaa
tatctgtttggctctgttggtgatgatcactacctacttatatgggacctccgctcctct
ccggccaacaaacccatccaatcagttgttgcccatcaaggtgaggttaattgcttagct
ttcaatcctttcaatgaatgggttgtggctactggttctacagataaaactgttaagctg
tttgaccttcgcaagataaatactgcactccacacctttgattgtcacaaagaggaggtt
ttccaaataggatggagccccaagaatgagactattctagcttcctgctgtcttggccgg
aggcttatggtgtgggacctgagcagaattgatcaagaacaaaccccagaagatgcagag
gatggcccaccggagttgcttttcatccatgggggtcacacaagcaaaatctctgatttc
tcctggaacccatgtgaggattgggttgttgccagtgtagcggaagataacattttacaa
atctggcagatggctgaaaacatctatcacgatgaagatgatgtacccggagatgattct
aaagccccataa

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