Aristolochia californica: 137951746
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Entry
137951746 CDS
T10486
Name
(GenBank) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
acak Aristolochia californica
Pathway
acak04120
Ubiquitin mediated proteolysis
acak04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137951746
04120 Ubiquitin mediated proteolysis
137951746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137951746
Enzymes [BR:
acak01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137951746
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
U-box type E3
137951746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF5770
Motif
Other DBs
NCBI-GeneID:
137951746
NCBI-ProteinID:
XP_068654730
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MATQKPHRSPAEIEDVILRKIFLVSLNGSVETDPRVVYLEMTAAEILSEGCSLLLSRELI
ERVLIDRLSIHFPGAEQPFAYLLGCYRRAYEESKKVVSMKDKNLKSEMESVIRQAKKLAV
SYCRIHLGNPDMFPGDGANNSSDLRLLDLIFSEVSTSVDGFGGPSFGSGVSSPPGFLDEF
FRDSDYDGLEPILATLYEDLRDKVLKVSALGNFQQPLRALMLLVSFPNCAKGLVNHRRWI
PKGDIMNGRIIEMASIFGPFFHVSALPDHTIFKSEPDVGQQCFSEASNRRPADLLSSFST
IKTVMNSLYDGLGEVLLTLLKNTDTREGVLEYLAAVIKTNASRSHLQVDPLACASSASFV
NLSAVMLRLCEPFLDANLTKKDKIDPDYVFNNSRLDLRGLTALHASSEEVSQWIEKEESE
KRVLQSHEATSSGSNPGVSDLSKTKPLPKYGGNRKYSFICECFFMTARVLNLGLLKLFSD
FKNLMQDLSRYEDALASIKAMQGQEAPQRLALDIARLEKDIELYTQEKLCYEAQILRDAG
LFQRALSFYRLMIIWLVDCIGGSRMPLPPECPMVFASMPEHFVEDAMELLLFASRIPRAL
DGFLLDDFLNFIIMFMASPSYIRNPYLRAKMVEVLNCWMPHRSGSSATASLFEGHPLSLD
YLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRSAWRQIAREEEKGV
YLNFLNFLINDSIYLLDESLNKILELKELEAEMANAAEWERRPAQERQERTRLHHSQENI
IRIDMKLANEDVGMLAFTSEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRRALSLKDPE
KYEFRPKKLLKQIVDIYVHLAKGDKDNVFPTAISRDGRSYNEQLFAAAADVLRKIGEDGR
VIQEFIELGAKAKVAALEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVI
QRHLLSDNSDPFNRSQLTQDMLIPNIELKARIEEFMRSHSLKKD
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccagaaaccacacaggagtccggcagaaattgaagacgtaatcttgcggaag
atttttttggtttctctaaatggttcggttgaaactgatcctagagtggtttatcttgaa
atgactgctgctgagattcttagtgaaggctgtagtctcctcttgtctcgtgagttgatc
gaacgagtcttaattgacaggctctcaatccactttcctggagcggagcaaccttttgca
tacctattagggtgttatcggcgagcttatgaagaatcaaagaaagtggtctccatgaaa
gataagaatctaaagtccgagatggaatcggtcattcgacaggccaagaaattagccgtt
tcatattgtcgtattcacttaggcaatcccgatatgtttcccggtgatggagcaaataat
tcaagtgatttgcgattactagatttgattttttcggaggtctcgacttcggttgatggg
tttggcggccctagttttggaagtggagtgagttctccacctgggtttctggacgagttc
ttccgggactctgattatgatggtttggaacctatattagcaacattgtatgaagacttg
agggataaggtactgaaggtgtcggctcttggaaattttcagcagcctctgagagctttg
atgttgttggttagtttcccaaactgtgcaaaagggctggtgaatcacaggcgttggatc
cccaaaggtgatattatgaatggaaggattattgagatggctagcatttttgggcccttt
tttcatgttagtgcccttccagatcatactatttttaaaagtgaacctgatgttggccag
cagtgcttctcagaagcatctaatcgtcgtccagctgatctactatcttctttttctaca
attaagactgtaatgaacagcttgtatgatggccttggagaagtgctgcttacactcctt
aagaacacagataccagggaaggtgtgcttgagtatctcgcagctgtaatcaagacaaat
gcatctaggtctcatttgcaggttgacccattagcttgtgcaagttctgcttcatttgtc
aatctaagcgcagtcatgcttcgattatgtgaaccctttttagatgccaacttgacgaag
aaagataaaattgatccagattatgtgttcaataactcccgcttggatttaagaggcctg
acagctctccatgcatcatctgaggaagtttcccagtggattgaaaaagaagaatctgag
aaacgagttttacaatctcatgaagccacgagctctggaagtaatcctggggtatccgat
ctttcgaaaaccaaaccactgccaaagtatggtggaaatcgtaaatattcatttatttgt
gaatgtttctttatgactgcacgagtgctcaatttggggctgttgaagttattttcagac
tttaagaatctcatgcaggatctgtcaaggtatgaagatgctctggcttccatcaaggct
atgcagggtcaagaggccccacaaagacttgcccttgatatagctcgtcttgaaaaagat
attgaactatacacacaagagaagctatgctatgaagctcaaatattaagagatgcagga
ctatttcaacgggcactatctttttataggttaatgattatttggttggtggattgtatt
ggtgggtctagaatgcctttgccgccagaatgtccaatggtatttgcatctatgccagaa
cactttgtggaagatgccatggaattgctgctttttgcttctcggattccacgagccctt
gatgggtttttattggatgactttttgaacttcataatcatgttcatggcaagcccttca
tatatcagaaatccttatctacgggcaaagatggtggaagtcttgaattgttggatgcca
catagaagtggttcatcagctactgcctccctttttgaagggcacccactctcacttgat
tatcttgtgcgtaatcttctgaagctctatgtggatattgagttcactggttctcacaca
cagttctatgataagttcaacatccgccacaacattgccgaacttctggagtatttatgg
caggtccctagccatcggagtgcatggagacagattgccagagaggaggagaagggagtc
tatttgaactttttgaatttcctgatcaatgatagtatctatcttcttgatgaaagtctt
aataaaatcctagaactaaaggagttggaagctgagatggccaatgctgcagaatgggaa
cgtagacctgctcaagagaggcaggaaagaacacgtctccatcattctcaggagaatatt
attcgaatagacatgaagttagcgaatgaagatgttggtatgctggcatttacttcagaa
caaattactgctccattcttgctgccagagatggtggacagagtggcaagcatgctgaat
tacttcttgctacaacttgttggaccccaacgccgtgctcttagtttgaaagaccctgag
aagtatgagtttagaccaaagaaattgctgaagcaaattgtcgacatctatgttcatctt
gcaaagggtgacaaggataatgtttttccaacagccatttccagagacggccggtcatac
aatgaacagctatttgctgcagcagcagatgttttaaggaaaataggcgaggatggaagg
gtgattcaggagttcattgaacttggtgcaaaagcaaaagttgcagcattggaggcaatg
gatgctgaagctgcccttggggatattccagatgaatttcttgacccaattcagtacact
ttgatgaaggatcctgttatcctaccttcttcaagaatcactgtggatcgacctgttatc
caaaggcacttgctgagtgacaatagtgatccattcaaccgttcacaactgactcaagac
atgcttattcctaatattgaactgaaagcaagaattgaagaattcatgcgatcccatagt
ttgaagaaggattga
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