KEGG   Aristolochia californica: 137951768
Entry
137951768         CDS       T10486                                 
Name
(GenBank) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
acak  Aristolochia californica
Pathway
acak03018  RNA degradation
acak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137951768
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137951768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acak03019]
    137951768
   03041 Spliceosome [BR:acak03041]
    137951768
Messenger RNA biogenesis [BR:acak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137951768
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137951768
Spliceosome [BR:acak03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137951768
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 137951768
NCBI-ProteinID: XP_068654762
LinkDB
Position
Unknown
AA seq 151 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETNKSRSDRKPPGVGRGRGRGREDGSSGRPSKGGIGRGQ
DDGMKGMGGGRGRGGSGGKGAGNRGVGRGRG
NT seq 456 nt   +upstreamnt  +downstreamnt
atgcttcctctgtctctcctaaagacagctcaaggtcatcctatgttggtggagctcaag
aatggagaaacttataatgggcatttggtgaattgtgacacctggatgaacattcatctc
cgagaagtcatttgcacttcaaaagacggggacaggttttggcgaatgcctgagtgttat
attcgtggaaatacaattaagtatcttcgagttccagatgaggtgattgataaagtccag
gaagaaactaataagagccgctcagataggaagcctccgggtgtagggcgtggaagggga
agaggaagagaagatggaagtagtggcagaccttctaaaggaggtattggccgtgggcag
gatgatggtatgaaaggaatgggtggtggtcgaggtcgaggaggttctggcggtaaaggt
gctggtaacagaggtgttgggcgtggtcgtggctga

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