Aristolochia californica: 137951780
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Entry
137951780 CDS
T10486
Name
(GenBank) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
acak Aristolochia californica
Pathway
acak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137951780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137951780
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
137951780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
DZR
DZR_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
137951780
NCBI-ProteinID:
XP_068654790
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSFDLLLKLSCGECGSTIDLYGSNCKHLTLCLSCGKKMTESHSKCYDCGAPITRLIREYN
VRAITSNDKTYSIARFTAGLPNFSKKKSAENKWSLHKEGLQGRQMIDGLREKYKNKPWVL
EDETGQSQYQGHLEGSQSANYYLLMMQGKEFVAMPAGSWYNFNKEAQYKQLTLEEAEEKM
KNRRRTADGYQRWMMKAANNGPAAFGEVEKIDLGKERTEGGSRKKVDLDDDEAPTSDRGE
EDEEEEQTRKNRLDLNKKNVNDDEEGPRGGDHDLDDDDIEKGDDWEHEEKFTDDDEAVGN
DLEEREDLAPEVPAPPEIKQDDEDEEDDNEEGTKLSKSGKELKKLLGKAAGLNESDAEDD
EDDDDDLDDEIGLSPVLAPKSKQKDAPKEEPVESSPSKPSATPRGTPSQPKSAKTKRKAS
GEDVKPSSTPAKKLKSEHDLKPSSVKEEPSSTSKKGAPPKGSLCSKSGSTLSPAPVTEEE
IRAVLLQKAPVTTQDLVAKFKARLRTPEDKSGFAEILKRISKIQKTNGPNYVVLREK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatcttcttctgaagctgtcgtgtggtgaatgtgggtctaccattgatctg
tatggcagtaactgcaagcacttgacgctttgtttgtcatgcggaaagaaaatgacggag
agtcactccaaatgctacgactgtggagcccctatcactcgattaattagagaatacaac
gttcgtgctattaccagcaatgataagacttatagtattgctagatttactgctggtttg
ccaaatttctccaagaagaaaagcgcagaaaataagtggtctcttcacaaagaaggactt
caagggcgtcagatgattgatggcttgcgggagaagtataagaataagccatgggtgctg
gaggatgagacaggccaatcacagtatcaaggtcacctcgagggctcccagtctgcaaat
tattacctgttaatgatgcaggggaaggagtttgtagctatgccagctggttcttggtac
aacttcaataaagaggctcagtacaagcaacttacacttgaagaagcagaagagaagatg
aagaatcggaggagaactgcggatggatatcaaaggtggatgatgaaggcagcgaataat
gggcctgctgcatttggagaagttgagaagattgatcttggcaaagagaggactgaagga
gggtcccgcaaaaaagtagatcttgatgatgatgaggctcctacttcagatcgaggggaa
gaagacgaggaggaagagcagacaaggaaaaatagattggatctcaacaaaaaaaatgtg
aatgatgatgaagaaggtccaagaggaggagatcatgatcttgatgatgatgatattgaa
aaaggtgatgattgggagcatgaagaaaaattcactgatgatgatgaagctgtaggtaac
gatctggaggaaagagaggatttagcccctgaagttcctgcaccaccagaaattaagcag
gatgatgaagatgaagaagatgataacgaggagggaacaaagctgagcaaatctgggaaa
gaactgaaaaagctacttggaaaagctgcaggattaaatgaatctgatgctgaagatgat
gaggatgatgatgacgatctggacgatgaaattggattgtcacctgttttggctcccaaa
tcaaaacagaaagatgcacctaaagaagagcctgttgaaagcagtccttcaaaaccttct
gctactcctcgtggaactccatctcaaccaaagtcagctaagacaaagagaaaagctagt
ggagaggacgtaaagccatccagtacacctgcaaaaaagttgaaatctgaacatgattta
aagccttcaagtgttaaagaggaaccatcatccacttccaaaaagggtgcacctccaaaa
ggttctttatgttcaaaaagtgggtctacattgtctccagctcctgtgaccgaggaggaa
attagggctgttctgttgcagaaggccccggtgacaacacaggaccttgttgccaagttt
aaggcaagattaaggacaccagaggataaatcaggttttgctgagatcttgaagagaata
tctaaaattcagaagacaaatggaccaaactatgtcgtgttgagagaaaaatga
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