Aristolochia californica: 137952516
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Entry
137952516 CDS
T10486
Name
(GenBank) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137952516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137952516
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137952516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
FtsZ_C
Motif
Other DBs
NCBI-GeneID:
137952516
NCBI-ProteinID:
XP_068655690
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MPLFLSEEEFSRCSGDASLVAVKADLYIRDLILQLETAKAKSDASSITAEQTCTLLEQKY
VSLSFDFSNLQSENLSLSSALEKRASELAEVQAEKHQTHLKAIVKDGELERLSVEVSELH
KSRRQLLELLEQKDLEIGEKNSLIKSYLDKIVHLSDEIALKEAKLHDIEAESACCHAACA
RLSQEKELIERHNVWLNDELTAKVNSFIELRKSHTELESDMSAKLADVERQYNECLNSLS
WYKESLRELENKLTSVQEELCSTKDTAATNQERFSAEVATVSKLADLYKESAEEWSRKAG
DLEGVIKALETHLSQVENDYREKLEKEVSVKEDLEKEALDLKTKLEKCEAEIENARKDNE
MSLLPISSFENVSTMAGRWIGEHECNDKSKKEDCLLLVPKVPTGISGTALATSLLRDGWN
LVKMYEKYQEAVDALQHERLGRKHSEAVLERVLYEIEEKAEIILDERAEHERMVEAYKLM
EQKLQQSHTEDAKLENTIRELKADLRRHERDYDIAQKEVADLEKQVTLLLKECQDIQIRC
GGASVVGAEDCLTSDALEIDGDSDVEKIISEQLLTYKDINGLVEQNVQLRSLVRSLSDQG
DQRDAELREKFEDELRKHNDEATQKVAAVLQRSEEQVRMVEALHNSVAMYKRLYEEELKM
RSAKPISEDGKKDLMLLFEDSHEATKKAHEQVVERARNLEEELAKLRNEAISLRLERDKL
IMQANFAREQLERFMKESEHQREETNGIRARNVEFSQLIVDYQKKLRDSADSLLASEELS
RKLSMEVSVLKHEKDILATSEKRALDQVYSLTEKVHHLQASLDTIQSAADVREEARTKER
RKHEDYVKQIEREWSEAKKELQEERDRVRTLTHDKELTLKDAMREVQQQGKELANALHAV
TAAEARAAAAEARCSNLETSIKSSERKIVDVNGGSDLSMHYTNEVAADFQKAKEEIERMK
EEAQSNKDHMLQYKEIVQVNEVALKQIESAHENFKSEAERLKSSLEAEIVSLNTRVSELE
RDVVSKTAEASSAISEKEENLYSAFSEINQLKEENSKKISQLMELEMQISSLREELERKH
QCWRTAQDNYERQVTLQSETIQELTKTSQALAALQDENSKLHKLADAQKSEIDVLKATWE
TEKTLLEKLKYEAEKKYEEINEQNKILHSHLEALHIKLAEKERISAGVSSASSDLDVQAG
DGLQTVVSYLRRSKEIAESEMSLLKQEKLRLQSQLESALKASDTAQAILHTERANSRKML
LTDEEFKSLKLQVNELNLLRESNMQIREENKHNFEECQKLRETAQKVKAEADHLNSLLKE
KDTQLDVSRKKAEMLNAERANLENRISELLEKTKGFDVEDYNLLKDNYQNIQLKLGEQQA
EVEESKKLINQKEEMIVKLEEDLASSQSRILEIEKRLNDTLQAEAVLRAEIEKHKRIISN
FKKKADALAKEKEEGNKEKQTLSKQLEDLTNEKQVLLKQMEDVVKEKQSLSKQLEDSRSS
KKVIVDTSSEQAMKEKDTRIQILEKTLEREKARRVKVEQVVFVKVTQVQKERERVMEELE
KHKLAKDNQQQTSGTLATELPVEIGLNEQATAYMSAVDDLEEAAQSALSDAAVASPVDIS
AGLAGHQGPQNLINQNPAAVPTSSLQAKSIDEREKRPLVSKPSTETRKMGRRLVRPHLER
TQEPSNDVEMPEVEGPPVIEGQTTVEETKPRPSHEPEAQSDPTALLHVPSARKRQASSTA
SEFREGTPEQESTDGGPVAKKTKGMEGPSEGAFMEDQLNIQSSKIGESSLPADESGEATT
DIMPASNEEIADAAKDEAMEESTDMEDVKDPLAGSHQGDLESDSVSIVEELLVEQPGQAE
ECPGGDPKGTDVPDPQHSTAEVESEKEEGEFVFEGAEQQEGGDTFSSLGDMEAGDSLVEP
LIEDSTAEMLPLEVVLIERNVHGEATEEADEGTDKPSEDKPSNNHNSSVLKSSQQSKQVS
FGGGGGASSSVVSESLSLKQSIPRSPVKETEDKELQPVRRIVNLGERARENALLRRAGAG
VVPTPTPARGRGRAPTLVKRGGRGRGVRGARGQTREKEQG
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttttctctccgaagaagaatttagccggtgctccggcgacgcttctctggtg
gccgtgaaggccgacttgtacatacgcgatctcatacttcaacttgaaaccgcgaaagcc
aaatccgatgcttcgtcgattactgccgagcaaacttgcactctcctcgaacagaagtac
gtatctctttctttcgatttctccaatcttcagtcggagaacctttctctctcttccgct
ctagaaaaacgcgcgtctgagctcgccgaggtccaggcggaaaagcaccagactcacctg
aaagctattgtgaaggatggagagcttgagaggttatcagtcgaggtttcggagctgcat
aagtcgaggaggcagttgttggagctgttggagcagaaggatttggagataggagagaaa
aattctctcataaaaagctatttggacaaaattgtccacttgtcagatgagatcgcttta
aaagaggctaagttacatgacattgaggcagaatctgcatgttgtcatgctgcctgtgct
cgtctctctcaggagaaggaacttattgagaggcacaatgtttggcttaatgatgagttg
actgccaaagttaatagcttcattgagcttcgcaaaagccatactgaattagagtcggat
atgtctgcgaaattagctgatgttgagagacagtacaatgaatgtttgaactccttaagt
tggtacaaagagagtttacgtgaactcgaaaacaaattgacatctgtacaagaggaactc
tgttcaactaaagacaccgctgctactaatcaggagcgcttttctgcagaagtagcaacg
gtatctaaacttgctgatttgtacaaagagagtgctgaagaatggtctaggaaggcaggt
gatcttgaaggtgtaattaaagcactggaaacacatttgagtcaggtggaaaatgattac
agagaaaaacttgagaaagaagtgtctgtgaaggaagatttggaaaaggaagctctggac
ttgaagacgaaactggaaaaatgtgaagcagagattgagaatgctagaaaagataatgaa
atgagtcttcttcctatatcgagctttgaaaatgtttcaactatggcaggcagatggatt
ggtgaacatgaatgtaatgataaaagtaaaaaagaggattgtctcttacttgtaccaaag
gtaccgacaggtatttcaggtactgctttggcaacgtctcttttgcgtgatggttggaat
ttggttaaaatgtatgagaaatatcaagaagctgttgatgccttgcaacatgaaagattg
ggtcggaagcactcagaggctgtgttggaaagggttctatatgaaatagaggagaaagct
gagatcattttggatgaaagagctgagcacgagagaatggtggaagcatacaaattaatg
gagcagaaacttcagcagtcacacactgaggatgctaagcttgagaataccatccgtgag
ttgaaggctgacttgaggaggcacgaacgagattatgatattgcccagaaagaggtagct
gatctcgaaaagcaggtgacacttctacttaaagaatgtcaagatatacaaattcgctgt
ggaggtgcaagcgtagttggtgctgaagattgtcttactagtgatgctctggagatagat
ggtgattctgatgtggagaagataatttcagagcaacttttaacatataaagatataaat
gggctagttgaacagaatgtccagctgcgaagccttgttcgcagtctttctgaccaggga
gaccagagagatgcagaattaagggagaagtttgaagatgaacttcggaagcataatgac
gaagccacacagaaagtcgcagctgttttacagaggtcagaggaacaagtacgcatggtg
gaagcacttcacaattctgtagcaatgtataaaagattgtatgaagaagaacttaaaatg
cggtctgccaaacctatctctgaggatgggaagaaggatcttatgcttttgttcgaggat
tctcatgaagcaacaaaaaaggctcatgagcaagttgtcgaacgtgctagaaatcttgaa
gaggaattagctaagttaaggaatgaagctatttcattgcgcttggagcgtgataaattg
attatgcaagcaaattttgcacgtgaacagttggaaaggtttatgaaggaatcagagcac
cagagagaagaaactaatggaattcgggctagaaatgtggagttctcccaattaatagtt
gattatcagaagaaactcagagatagtgctgattcattgttagcctctgaggaactttct
agaaagttatctatggaggtgtctgttctgaaacatgaaaaggatattttggcaacatct
gaaaaaagagctttggatcaagtttatagtttgactgagaaagtccaccaccttcaggca
agtcttgatacaatccaaagtgcagctgatgttcgtgaggaagcaagaactaaggaaagg
agaaagcatgaggactatgtaaaacagattgaaagagaatggtctgaagctaaaaaggag
cttcaagaagaaagggatcgagttcgaactctcacacatgacaaggaactaacacttaaa
gatgctatgagagaagttcaacaacaaggaaaagaactagcaaatgctctacatgctgtt
actgctgctgaagccagggcagcagctgctgaggctcgctgctcaaaccttgaaacaagc
ataaaatcgtctgagagaaagattgtggatgtcaatggcggatctgatctttcaatgcac
tatacaaatgaggttgctgcagatttccagaaagcaaaagaagaaattgaaagaatgaaa
gaggaagctcaatctaacaaggatcacatgcttcagtataaagaaattgtgcaagtgaac
gaggttgcattgaaacagattgagtctgctcatgaaaatttcaagtctgaagcagaaagg
ctgaagagttcactagaggctgaaattgtttctcttaacacaagggtttctgaacttgag
agagatgttgtttccaagacagcagaagcctcctcggccatttcagagaaagaagaaaac
ctctattctgcattttcagaaatcaaccagctcaaagaagaaaattctaagaaaatatcc
cagcttatggagttagaaatgcaaatctcatctctcagggaagagttggagaggaagcac
caatgttggcgcactgctcaggataactatgaaagacaggttacactccaatctgagaca
attcaagagttgacaaaaacttcacaggcactagcggcactgcaagatgaaaactcaaag
ctgcacaaattagcagatgcacaaaaaagtgaaattgatgtactgaaagcaacatgggaa
acagagaagaccttattagaaaaactgaagtatgaggcagagaagaagtacgaagagata
aatgaacagaacaagattctgcatagtcacttagaagcattgcatattaaattggctgag
aaggagcgaatctctgctggagtttcctctgcaagctctgatctggatgtgcaagcgggt
gatggcctgcagactgttgttagttaccttcggagatcaaaggagatagcagaaagtgag
atgtcattgcttaaacaagaaaagctgcggttgcaatctcaacttgaaagtgcactcaaa
gcgtctgacactgcccaagccatacttcatactgagcgtgcaaattctcgaaaaatgttg
ttaacagatgaagagttcaagtctcttaagcttcaggtaaatgagttgaatttgcttcgt
gaaagcaatatgcaaatccgagaggagaataaacacaactttgaagaatgccagaaacta
cgggaaactgctcagaaggttaaggcagaagctgaccacttgaatagcctgctgaaagag
aaggacactcagttagatgtttctagaaaaaaagctgagatgctcaatgcagaaagggct
aacttagagaacaggatttctgagttacttgagaagaccaaaggttttgatgtggaggat
tataatctattgaaggataactatcaaaacattcagttgaaacttggagagcaacaagcc
gaggtggaagagtctaagaagcttattaatcagaaagaagaaatgatagttaaattggag
gaagaccttgcgagcagccaatctagaattttggagatagagaagaggctaaatgatact
ctccaagctgaggcagttttaagagcagaaattgaaaagcacaaaaggataatatccaat
ttcaagaagaaagctgatgccttggcaaaggaaaaagaagaaggtaacaaagagaagcaa
accctttcaaaacagttggaggatttgacgaacgaaaaacaagtgttgcttaaacagatg
gaggatgtagtcaaggagaagcaatctctgagtaaacagttagaggattctcgatcaagt
aagaaggtcattgtagataccagcagtgaacaagcaatgaaagaaaaggacaccaggata
cagatattagagaaaacccttgaaagggaaaaagcaaggcgggtgaaggttgagcaagtt
gttttcgttaaagtgactcaagttcagaaggagagagagagagtgatggaagagcttgag
aagcataagctagccaaagacaaccagcaacagactagtggaacgttggcaactgagctt
cctgttgagattggcttaaatgagcaagcaactgcatatatgtcagctgtagatgacttg
gaagaagcagcacaatctgctttaagtgatgctgcagtggcttctcctgtggatatctcg
gcagggcttgcaggtcatcaaggccctcaaaatctcattaaccagaatccagctgcagta
cctacaagttctttgcaagctaaatctatagatgaaagagagaaacggcctcttgtgtca
aagcctagtactgaaactcggaaaatgggaagaaggttagtccggcctcatctggaacgt
actcaagagccaagcaatgatgttgagatgccagaagtggaaggccctcctgtgatagaa
gggcagaccacagtcgaggagacaaagcctcggccatctcatgaaccagaggcacaaagt
gatcctactgctctgctccatgttccgtctgcacgtaagcgccaggcctcttccactgcc
tcggaatttcgagaaggaactcctgagcaagagagcactgatggcggacctgttgcaaag
aagaccaaaggtatggaggggccctcagaaggtgcttttatggaggaccaattgaacatc
cagtcttctaaaattggtgaaagctccttacctgcagatgagtctggtgaagccactact
gatataatgccagcttcaaatgaggagatagctgatgctgcaaaagatgaggcaatggag
gagtcaacggatatggaggatgtgaaagatccattagctgggtcacatcaaggtgactta
gaaagcgattctgtgtcaatagtggaagaattattagtagagcagccaggacaagcagag
gagtgtcctggtggagatcctaagggcactgatgtgccagatccacagcactctactgca
gaagtggagagtgaaaaggaagagggtgagtttgtctttgagggagcagagcagcaagag
ggcggtgatactttcagtagtttgggtgacatggaagctggagatagcctggttgaacca
cttatagaagattctactgctgagatgctacctctcgaagtggtgctaattgagaggaat
gtgcatggagaggcaactgaagaggcagatgaaggcacagataagcccagtgaagataaa
ccaagcaataaccacaacagttctgtcttgaagtcttctcagcaaagcaaacaagtttct
tttggtggtggggggggagcatcctcgagtgttgtttcagagagtctttctctgaaacag
tccattcccagaagccctgtgaaggaaacagaggataaggaacttcaacctgttaggaga
attgtaaacttgggcgagagagctagagagaatgctttacttcgacgagctggagcagga
gtagtaccgactcctactccagcaagaggtcgtgggagagctcctacactagtgaagcgc
ggtggacgtggaagaggtgtacgaggggctcgagggcagacgagggaaaaagagcaaggt
tga
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integrated database retrieval system