Aristolochia californica: 137952859
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Entry
137952859 CDS
T10486
Name
(GenBank) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acak03009
]
137952859
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137952859
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
90S particles
Helicases
137952859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
ATPase
DUF5372
AAA_23
Motif
Other DBs
NCBI-GeneID:
137952859
NCBI-ProteinID:
XP_068656047
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MIDQEMVPELKNSELSAEGSNVVLLPGTKKKAKTNGKDKVKVRLPPQLSKAQKHKLMKLQ
EEKQKRAMELKSIEILKKHSIKDDVYSLLNSSGTIGQVETMREKRRRAVQFSKVGLELPP
DDPPVKKSRIQEDQENAVLVSIGEENEYSDRHWVLDKKDYSGQCEDQDNALKQSCSAVHP
LVGSQIVSLVPETCGRDTLTYLQEGRNNSSITSSACDVQNDNNLQDMEKRDSPKVLQNIS
SLAGSTLLRCINKKEVVHVSRPSEVESNRANLPIVMMEQEIMEAINENPSTIVCGETGCG
KTTQVPQFLYEAGFGSNSCTGKQGIIGVTQPRRVAVLATAKRVAYELGLGLGKEVGFQVR
HDKLIGASCSIKFMTDGILLREVQSDFLLRHYSVIILDEAHERSLNTDILVGMLSRVIEE
RQREYAKQQEKVLSGINIRPEYMISPLKLILMSATLRVEDFILNKRLFRQPPPVIDVPTR
QFPVTIHFSKRTEIVDYVGQAYKKVISIHKRLPPGGILVFVTGQREVEYLCKKLRNASRQ
WVQKFSYHNGNSEVPPQCSQTEESEGFNMKDISEAFETDGRGYGNQTGRFNSLDEDSNDF
ERDSNSSDLGTESEQEAETDESDLSSNEEEEINMEEHLFKEPGSYASLKAAFEVLAGKKI
KNESEEKPKPVPSTTDPNKIEGKHEKERSSPGGLQVLPLYAMLPPSQQLRVFDNVREGER
LVVVATNVAETSLTIPGIKYVVDTGREKVKNYNYANGMATYEVQRISKASGAQRAGRAGR
TGPGHCYRLYSSAVFNNQFSDFSGAEITTIPVDGVVLQLKSMGIHKVANFPFPTPPKTEA
VKDAERCLEALGALDKEGRLTAIGEAMAKFPMSPHHSRMLLTVFQMMRRKRNYARANLVL
GYAIGVSAALSFSNPFIMRIGGSQQYKDGIGQDGMNNEFLGELGRDVTVDSGRVHDFEEK
LKQKKLKEAAKKARENFRNSSSDALTVAYALQLFELSENQEEFCSTSGLHFKTMDEMSKL
RKQVLQLILYHNSVGGFPHDFSWAQDNPEDIERAWRVSSEKHPLLSYEEELLGQAICAGW
ADRVAKRTRVATESLDKDRKVGAVRYQACMVNETVFLHRWSSVSLSAPEFLVYNELLQTK
RPYMHGVTRVKPEWLVKYARPMCTFSSPLADPKPYYEPLEDQAFCWVRPTFGPHLWQLRA
TGVPIKDEVLRVSVFACALLEGKVLPCLRSAQKFLAAPPASLLRPEANGQRRVGNLLHKL
HNKSRTIDSRAMLRKAWDENPDELCLEIQHWFHKSFHDKFKDLWEKMHQEIIVGARDLFP
EKEKKRSKCLPVKMNANGSD
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccaagaaatggtacctgaactgaagaattctgagctctctgccgagggcagc
aatgtggtcctcttgccagggacaaagaagaaagcaaaaacaaatggcaaagataaggtt
aaggtacgattgccgccacaattgagtaaagcccagaaacacaaattaatgaagctgcag
gaggagaagcagaagagggctatggagttgaagagtatagagattctaaagaagcacagt
attaaggatgatgtgtattctcttctgaactcttcaggtactattggtcaggtggaaaca
atgcgtgaaaagcgaaggcgggctgttcaattttcaaaggttggactggaattgccaccg
gatgatccacctgttaagaaaagtcgaattcaggaggaccaagagaatgctgttttagtc
tcaattggagaagagaatgaatattctgatcgacattgggtgctggacaagaaagattat
tctggtcaatgtgaagatcaggacaatgccttgaaacaaagttgtagtgctgtacaccca
ttagttggttctcagattgtgtctctggtccctgaaacttgtggtagggacaccctcaca
tatttacaggagggccgaaataattcttcaataacttcctctgcttgtgatgtccaaaat
gacaataatttgcaggatatggagaaaagagattcaccaaaagttctgcagaatatcagc
tctcttgctggttctacattgctgaggtgcattaataagaaagaagttgtgcatgtatca
agaccaagtgaggttgaatcaaatagggcaaatctccccattgtaatgatggagcaggag
ataatggaagctattaatgaaaatccctccactattgtgtgtggagaaactggatgtggt
aaaactactcaagttcctcagttcctctatgaagcaggttttggttcaaatagctgcacc
ggcaaacaaggaattattggtgttacacagccacgccgtgttgctgtccttgctactgct
aagagagttgcttatgagcttggtcttggccttgggaaggaagttggctttcaggttagg
catgataagctgattggtgccagttgctccataaagttcatgacagatggaattttgctt
cgagaagttcagagtgattttttgttgaggcattattctgttattattttggatgaggct
catgagaggagcttgaatacagatatccttgtcggaatgctttcacgggtcatagaagag
cgtcagagggaatacgcaaagcagcaagagaaagtactgtcagggataaacattaggcca
gagtacatgatttcccctttaaaactcatactcatgagtgctaccttgcgtgttgaagat
tttatcttaaataagagattattccgtcagccccctccagtgattgatgttccaactagg
cagtttcctgtcaccattcacttctctaagagaactgagatagtggactatgtaggccag
gcatacaaaaaggtcatatctatacacaaaaggctgccaccgggtggcatactggtattt
gtcactggtcagagggaagtggaatacttgtgtaagaaactccgcaatgcttctagacaa
tgggtacagaaattcagctaccataatggcaatagtgaagttcctcctcaatgttcacaa
acagaggaaagtgaaggatttaatatgaaggacataagtgaagcctttgagactgatggt
cgtggatatggcaatcaaactggaagatttaactctcttgatgaagactcaaatgacttt
gaaagggattctaattcatctgatctggggacagaaagtgaacaagaggctgagactgat
gagagtgatttgtccagtaatgaagaagaggagattaacatggaagaacatctttttaaa
gagcccggaagctatgcttcactaaaggctgcttttgaagttctagcaggtaaaaaaata
aaaaatgaatctgaagagaaaccaaaaccagttccttctactactgatcctaataagatt
gaagggaaacatgaaaaagaaagatcgagtccaggtggtttgcaagttctacccctttat
gctatgttacctccttcacagcaacttcgtgtttttgacaatgttcgtgaaggagaacgt
cttgttgtagtagcaactaatgtggctgagacctctttaacaattcctggtataaaatat
gtggtggacactggaagggaaaaagtgaagaactacaattatgccaatggaatggcaaca
tatgaagttcaaaggataagcaaggcgtcaggtgctcaacgtgcagggcgagctggaagg
acaggacctggtcattgttatcgtctctattcctctgctgtatttaacaatcagttttca
gatttctcaggtgcagagatcacaaccattcctgttgatggggttgtccttcaattgaag
tccatgggaattcataaggtggcaaacttcccttttcccacccctcctaagactgaggct
gtaaaggatgctgagcgttgcttggaagctcttggggcacttgataaggaaggcagactc
actgccattggagaggcgatggcaaaatttcccatgagtcctcatcattctcgcatgctg
ctgactgttttccaaatgatgaggagaaaaagaaactatgctcgggcaaatttggttctt
ggctatgccattggtgtatctgcagctttaagcttttcaaatccttttataatgaggata
ggtggttcacaacaatataaagatggcataggtcaggatgggatgaacaatgagttttta
ggtgaacttggtagagatgtaactgtcgatagtgggagagttcatgattttgaggaaaaa
ctaaagcagaagaaactaaaagaggcggcaaagaaggctcgtgaaaattttcgtaactct
tcaagtgatgccttgactgttgcatatgctctccagttgtttgagctttctgagaatcaa
gaggaattttgctccactagtggcttgcactttaaaaccatggatgagatgtccaaattg
aggaaacaggtacttcagctgatactttatcataattctgtaggtgggttccctcatgat
ttctcatgggctcaggacaatcctgaggatatagaacgagcttggagggtctcatcagag
aagcacccattactatcatatgaagaagagctcttagggcaggcaatttgtgctggctgg
gcagacagagtggctaagcgtactagggttgctactgaatctttggacaaggatcgaaaa
gttggtgctgttcgatatcaagcatgcatggtcaacgaaactgtttttctacatcgatgg
tcatctgtttctttatcagcaccggagtttcttgtgtacaatgagcttcttcaaacaaaa
cgtccatacatgcatggagtgactagagtcaagccagagtggcttgttaaatatgccaga
cctatgtgcaccttctcttcgcctctagctgacccaaaaccatattatgagcctcttgag
gatcaagccttttgttgggtcaggccaacctttggtccgcatctatggcagctccgagct
actggtgtgccaataaaggacgaagtacttcgggtatcggtttttgcttgtgctctgctt
gaaggtaaagtcttgccatgtttaagatctgcccaaaaattcttggctgcaccacctgcc
agccttttgaggcctgaggcaaatggtcaaaggcgtgttggcaatttactacataagtta
cacaataagtcgagaacaattgacagtagggccatgttaagaaaggcctgggatgagaat
cctgatgaattgtgtttagaaatccagcactggtttcataagagttttcatgacaaattc
aaagatttatgggagaaaatgcatcaagaaattattgtaggtgcgagagatctctttcca
gagaaagaaaaaaagagaagtaaatgcttgccagtaaaaatgaacgctaatggttctgat
tga
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