Aristolochia californica: 137952950
Help
Entry
137952950 CDS
T10486
Name
(RefSeq) protein PAT1 homolog
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137952950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137952950
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137952950
mRNA degradation factors
5'-3' decay
Decapping complex
137952950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
137952950
NCBI-ProteinID:
XP_068656183
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MENFDGGGFEGSPNPNQKDLREFADGSSGNTCFDASQYAFFGKNVLEEVELGGLENVDDE
DVGLVGFDDEEYRFSVLGDREEGDALESSDIDDLASTFSKLNKVVSEPRTHGTIGDRGFS
RESSSTADWAQEQDFSTWLDQQILDAENVQEGKRWWSQPHPSSARVAESKPLYRASSYPS
PQQQQSSEPILIPKSSFTSYPPPGGRSQASPNHSHHSALTSGPQLPFSAPNVSPFSGPQL
HLPGLPPHGLPYGGNIHQLNPPNVSINNRPQNPWLNQANLFSGDHPSLLPNLMQQQLPHP
NGLLPSQFFAQQQHQRLHHVQSTLAQLSVMQSQLFNRHPSPNLMNKYEAIMGGMADPRDQ
RSKPTQRGRQNLRFSQQGSETSSHKNDNGWPQFRSKYMSADEIEGILRMQHAATHSNDPY
IDDYYHQACLAKKSARSRLKHHFCPSYLRDLPSRARANNESHAYLQVDALGRVPFSSIRR
PRPLLEVDPPTASGDNVHEKASEKPLEQEPMLAARITIEDGLCLLLDVDDIDRLLQLSQP
QDGGSQLRRRRQVLLEGLAASLQLVDPLGPGKAGHSVGLAPKDDLVFLRLVSLPKGRKLL
SRYLQLLFPGSELTRIVSMAIFRHLRFLFGGLPADPSAAETTMNLARTVSSCARGMDLSA
LSACLAAVVCSPEQPPLRPLGSSAGDGSSIIIKSVLERATDLLTDPHVASNYSMPNRALW
QASFDAFFGLLTKYCLSKYDTIIQSLLMQASNTTVIGPESARAISKEMPVELLRASLPHT
DERQRKMLLDFAQRSMPVPGFTGQGSGGGQINSESVPG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttcgacggtggaggttttgaaggaagccctaaccccaaccagaaagacctg
agagaattcgctgacggttcttcaggtaatacatgttttgatgcatcgcagtatgccttc
tttggaaagaacgtgttagaggaagttgagttgggtggtttagaaaatgttgatgatgaa
gatgttgggttggttggttttgatgatgaggagtatcgtttctctgtccttggggatagg
gaagagggtgatgcattggaatcttctgatattgacgatcttgcaagtactttttcaaag
ctgaacaaggttgtgagtgaacccagaacccatggaactattggcgatcgaggtttctct
agggaaagttcttctactgcagattgggcacaggagcaagacttctctacctggttagat
cagcaaatattagacgctgaaaatgtccaggaaggcaaaagatggtggtctcagccccac
ccttcatcagcccgtgttgcagaatccaaaccattgtacagagcgtcttcttacccatcc
ccgcaacaacagcagtccagtgaaccaatcctaatacctaaatcatctttcacttcctac
cctcctcctggaggtcgatctcaggcttcaccaaaccactcacaccattcagctcttacc
agtgggcctcagcttcccttctctgccccaaatgtttcacctttttcgggtccacagctt
catttgccagggctaccacctcatgggcttccatatggtggaaatattcatcagcttaac
ccaccaaatgtatccattaataatcgtccacagaacccatggcttaaccaggccaacctt
ttctcaggtgatcatccaagtctgttgcccaatttgatgcaacagcagttacctcaccca
aatgggttattgccttctcaattttttgctcagcagcaacatcaaagacttcaccatgtt
caatcaactttagcacagctctcagttatgcagtctcaactttttaaccgtcatccttct
ccaaatctgatgaataaatatgaagcaatcatgggtgggatggcagatccacgagaccag
agatcaaaaccgactcagagagggagacagaaccttcgcttttctcagcagggttctgag
actagtagccataaaaatgataatgggtggcctcagttcagatccaagtatatgtcagct
gatgaaatcgagggtattctcaggatgcaacatgctgcaactcacagcaatgatccatac
atagacgattactaccaccaagcttgtctggcaaaaaaatctgccaggtctaggctgaaa
catcatttttgtccaagttacttaagagatctgccttcacgtgcccgagccaataatgag
tctcacgcttatcttcaggttgatgctcttggtcgtgtacccttctcgtccatccgtagg
ccacgtcctcttcttgaagtcgacccacctactgcatcaggtgacaatgttcatgaaaaa
gcttctgaaaaacccctggaacaggagcccatgcttgcagctagaattaccattgaggat
ggactttgtcttcttctagatgtagatgatattgatcgactactacagttaagtcaacct
caagatggtgggtcacagctcaggcggaggcggcaggtattgcttgagggtcttgcagcc
tcactccaactagtagacccactgggccctggtaaagcaggccattcagttggcttagca
ccgaaggatgaccttgtcttcttacgattggtgtcacttccaaaaggcaggaaacttctc
tccagatacctccaacttctcttcccgggcagtgaactgacccgtatagtttccatggca
attttccgtcacctgagatttttgtttggtggtctgccagctgaccctagtgctgcagaa
acaacaatgaatcttgccaggactgtttcttcgtgtgcaaggggcatggatttaagtgct
cttagtgcctgcctagctgctgttgtttgttctcctgaacagccgcctctccgcccactg
ggtagttcagcaggcgatgggtcatccatcatcataaaatctgttcttgaaagggcaact
gatctcttaacagacccccatgttgctagcaattacagcatgccaaatcgggctctgtgg
caggcctcattcgacgcattctttggactgctcacaaaatactgcctcagtaagtatgac
acaataattcaatccttgctcatgcaggcttctaatacaacagtgattgggccagagtct
gctagggctataagcaaggaaatgccagttgagctattgcgtgctagccttcctcacact
gatgagcgtcagcgaaagatgctactggattttgcacaaaggtctatgccagttcctggg
tttactggccaaggaagtggtggtgggcagataaattcagaatctgtaccaggttaa
DBGET
integrated database retrieval system
