KEGG   Aristolochia californica: 137953081
Entry
137953081         CDS       T10486                                 
Name
(GenBank) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
acak  Aristolochia californica
Pathway
acak03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    137953081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acak04121]
    137953081
   03036 Chromosome and associated proteins [BR:acak03036]
    137953081
Enzymes [BR:acak01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137953081
Ubiquitin system [BR:acak04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    137953081
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     137953081
    Noncanonical PRC1 (PRC1.1)
     137953081
    Noncanonical PRC1 (PRC1.3/1.5)
     137953081
    Noncanonical PRC1 (PRC1.6)
     137953081
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 DUF3530 zf-RING_4 zf-UDP DUF7491 zf-rbx1 zf-RING_6 DUF7044 zf-Nse zf-RING_10 zf-C3HC4_5 zf-RING_11 ZNF512_C2HC
Other DBs
NCBI-GeneID: 137953081
NCBI-ProteinID: XP_068656391
LinkDB
Position
Unknown
AA seq 446 aa
MPAQKRSASDMENDDDDSPSAVQQQQQQQEQNGSEGSPPSSVDKDKDEFILVKLSEIRKE
VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPKYDA
LIAALYPDIDKYEEEELAFHEEEKNRNKQFQQIQASIAQTFKRQSEALGRRRATAKATAV
ALARKSGSYRSSSYLRGRGRHCRDTGGSDDDDDDVNGNEGEKDSSSADEPSPDVRPRRNR
RWGPHRFSSASNADGANDDNDEAEVSRESTGASPGRAGNPEVLVWGKGGTRSHTRYGSLS
GSNGKNSRNSRVAKLIDYLRSLEENDNEFDVHITLLPIDEKHIPSLERPHLSCRPSLSIR
HLCQFISLQIPVQSEELEILLKVPKTSPGPVFNASTSGNDPVRESNTEPSEEMKEMQLLG
GEETLRGLHASSSGNLVLVYRSKTPS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcctgctcagaagcgctctgcatccgacatggagaacgacgacgatgactctccctca
gctgtgcagcagcaacagcagcagcaagaacagaacggttctgaaggaagccctccctcc
agtgtcgacaaagataaagacgaattcatcctggtcaagttgtcagaaatacgtaaagaa
gtgcagtgtcccatatgtttagggattattcggaagacaagaactgtgatggagtgcttg
catcgattctgcagagagtgcattgacaaatcaatgcgactgggcaacaatgagtgtcct
gcatgccgaacacattgtgcaagtcgtcgttctttgagagatgatccaaagtatgatgcc
ctcattgcagctctgtatccagatattgataagtatgaggaagaggaattggcttttcat
gaagaggaaaagaatcgcaataagcagttccaacagattcaagcatctatagctcaaact
tttaaaagacaatcagaagcacttggtcgaagacgggcaacagcaaaagcaacagcagta
gctttagcaaggaaatcaggtagttatcgaagctcgagttatttgagagggagaggacgg
cactgcagagacacaggtggttctgatgatgatgacgatgatgtaaacggtaatgaagga
gagaaagattcatcctctgctgatgaaccctctccagatgttagaccaagaagaaatagg
aggtggggcccccatagattttcatcagcttcaaatgcagatggcgccaatgatgataat
gatgaagcagaagtaagcagggagagcactggggcttcaccagggcgagcaggtaaccct
gaagtgcttgtctggggcaagggaggcacacgcagtcatactcgatatggaagcctcagt
ggttcaaatggtaaaaattcaaggaatagtcgagtggctaagttgatagattaccttcga
agcttggaggaaaatgacaatgagtttgatgtgcatatcactcttcttcctatagacgag
aaacatataccaagcttggagagaccgcacctatcttgccggccatcattgtctataaga
cacctctgtcaatttatatctcttcaaattcctgtccagtcagaagaacttgagatatta
ctaaaagtgcccaagacttctcctgggcctgttttcaatgcatcaacttcaggaaatgat
ccagtcagggagtctaacactgagccttctgaagagatgaaggagatgcaactattgggt
ggtgaagaaaccctcagaggtttacatgcttcaagctctggcaacctagttctggtttat
cgatcaaaaacaccgagttag

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