Aristolochia californica: 137953684
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Entry
137953684 CDS
T10486
Name
(GenBank) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
acak Aristolochia californica
Pathway
acak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137953684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137953684
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137953684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
137953684
NCBI-ProteinID:
XP_068657251
LinkDB
All DBs
Position
Unknown
AA seq
201 aa
AA seq
DB search
MVATSPLVSVYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANQHSLRPDWQIGESVAIW
WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRY
GPVISTIPQQLSRFQFNMINS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggtggctacgtcgccgttggtgagtgtataccctctttcaagctatactttcgggacc
aaagagccgaaaatggaaaaggacacttcggtggcggatcgtctcgcccgaatgaaagtc
aactatatgaaggagggtatgcggacaagtgtggaagcaattctactggttcaggagcat
aaccatcctcacatacttcttcttcaaatcgggaatacattctgcaaactccctggtgga
cgtctaaaacctggagagaatgaaattgagggcttgaaacgaaaactttctagcaaactt
gcggctaatcaacatagcctccggccagattggcagataggagaatccgtagctatctgg
tggaggccaaactttgaaaccataatgtacccatactgccctcctcatatcacgaagccg
aaggagtgcaagaagcttttccttgttcacttgtcagaacgggagtattttgctgttcca
aagaacttgaaactgcttgctgtaccattgtttgaactctacgataatgtccagagatat
ggaccagttatctccactatcccccagcagctatccagatttcagttcaacatgatcaac
tcgtaa
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