Aristolochia californica: 137953833
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Entry
137953833 CDS
T10486
Name
(GenBank) uncharacterized protein isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
acak Aristolochia californica
Pathway
acak03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137953833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137953833
03019 Messenger RNA biogenesis [BR:
acak03019
]
137953833
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137953833
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137953833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
137953833
NCBI-ProteinID:
XP_068657447
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MLPFTPSFNGMQSHGGNSCVPQQVLFPAQGPVNSGNFGSSFNHLFPCSSGAQPQIPSHFH
APGNQSPLVPFGVDNTSMNFGNSHANAVSIPTRPPFPSASFPGVVSNHQHLSHAIQQTVH
QLGFVPHGHLSTVQQSFNPIASFQPACWQFCSHQPSQGVNQNPHGRVFLQTPMGCLSQMH
QMIDATPAVNFNVANQIVDMSGPEQCGNSTVNMNNRNIATDIMHKTVPNPNTFLSPLVDQ
KAMQVPPGPSQPSQGNTSLHSQGNTRKNFRNGPQGSRERYSPQKFQKHQSQHSGNPKGKF
SNNHRNGWKGQQSGAGKPNLMNCRKNPMHEHKRITTSLSYTDEEIKKWREERKRNFPTRL
NVEKNKSNQHPDHEDTKMRRQQLKQILAKQAELGVEVAELPTDYLSESENQVDRNLAERG
LRQKKGRFRNKFDRRGRHGGDEVHTKRQKLGQDATHGLWPSTRKPTLLEKLLSADIKRDK
SHLLQVFRFMVLNSFFKDLPDKPVGSPLARVRDGSGTEDIVNEKYTLNEGDDAVSKVENN
DDRDCDQEDAEDHGEQDENGCEGEEMVYGGQKDFREVQIDSSEGEEGEITD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttcacgccctccttcaatggaatgcagtcccatggtggcaatagttgcgtt
cctcagcaggtcttatttcccgcccaaggtcccgtgaactcgggtaattttggaagtagc
ttcaatcatctatttccatgttcttccggtgcccaaccacaaattccttctcattttcat
gccccgggaaaccagtctccacttgtgccatttggtgttgataacacaagtatgaatttc
gggaactcacacgcaaatgcagtgtccatacctactagacctcctttcccttcggcttct
tttcctggtgtcgtctcaaaccatcaacatctatcgcatgcaatccaacaaactgtgcat
caattgggttttgtgcctcatggccatctctccaccgtgcaacaaagttttaatccgatt
gcatcttttcaaccagcttgttggcaattttgctctcatcagccttcccaaggtgttaat
caaaatccacatggacgggttttcttgcagacccctatgggatgtttaagtcaaatgcat
caaatgatagatgctactccagcagttaattttaatgttgcaaatcaaatagtggatatg
tcaggccctgaacaatgtggaaactccactgtgaatatgaacaacagaaatatagccact
gatataatgcataaaacagtcccaaacccaaatacatttctatcacctctagtggatcaa
aaggctatgcaagtgcctcctggtcctagccagccgtcacaaggaaatacttctttacat
tctcagggaaatacaaggaagaatttccgaaatggtcctcaaggatctagagaaagatat
tcaccacaaaaattccagaaacaccaatcacagcattcaggcaatccaaaagggaaattc
agtaacaaccatagaaatggatggaaagggcaacaatcaggagctggaaaaccaaatctt
atgaactgtcgcaagaatcccatgcatgaacacaagagaatcaccacctcgttgagctat
acagacgaagaaataaaaaaatggcgggaagaacgcaagaggaattttccgacaagatta
aatgtagagaagaacaagtcaaaccagcacccagatcacgaagacactaaaatgcggcgc
cagcaactcaagcaaattctagcaaagcaagcagagttgggtgtggaagttgcagaatta
ccaactgactatctctcagaatcagaaaaccaagttgacagaaatctagctgagagagga
ctacggcaaaaaaagggtagattccgaaacaagtttgatagaagaggcaggcatggtgga
gatgaggtgcacaccaagaggcagaaattgggacaagacgcaacacatgggctttggcca
agcactaggaagccaacccttttggagaaactgctttctgctgatataaagagagataaa
agccatttgttgcaagtttttagattcatggtgctcaattccttcttcaaggacttgcct
gacaaaccggtgggctcccctttggccagggttagagatggatctggaacagaagatatt
gtcaatgaaaaatatacgttgaatgaaggggacgatgctgtatctaaggttgaaaataat
gatgatagggattgtgaccaagaagatgcagaagaccacggagaacaagatgaaaacggc
tgtgaaggagaagaaatggtttatggcggtcaaaaggatttcagagaagtgcaaattgat
agctctgagggagaagaaggagagattactgactag
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