Aristolochia californica: 137953841
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Entry
137953841 CDS
T10486
Name
(GenBank) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
acak Aristolochia californica
Pathway
acak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137953841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137953841
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
137953841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR
DZR_2
Motif
Other DBs
NCBI-GeneID:
137953841
NCBI-ProteinID:
XP_068657458
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSFDLLLKPSCGECGTATDLYGSYCKHLTLCLSCGKRMAESHSKCYDCGAPVTRLIREYN
VRTSTSNDKTYSIARFTAGLPSFSKKKSAENKWSLFKEGLQGRQITDGLREKYKNKPWVL
EDETGQSQYQGHLEGSQSANYYLLMMQGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM
KNRRRTADGYQRWMMKAANNGPAAFGEVEEIDLGKERTEGGSHKKVDIDDDETTTSEQGE
EDEEEEQARKNRLGFNIKKLDDDEEGLRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPAVPAPPEIKQDDEDEEDGNEEDGTKLSKSGKELKKLLGKAAGLNESDADD
DDEDDDMDDEIGLSPVLAPKSKQKDAPKEEPVESSPSKPPTAAPRGTPSQSKSAKTKRKD
SGEDIKPYSTPAKKLKSENVNSIRTCEDSKPSSVKKEPSFTSKNGAHPKVSLSSKSGSTL
VTAPVTEEEIRVVLLQKATVTTQDLVAKFKARLRTLEDKSAFAEILRRISKIQKTNGPSY
VVLREK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatcttcttctgaagccgtcgtgtggtgaatgtggaactgccactgatctt
tatggcagttactgcaagcacttgacgctttgtttgtcctgcggaaaaagaatggcggag
agtcactccaaatgctacgactgtggagctcccgttactcgattgattagagagtacaac
gtccggactagtaccagcaatgataagacttactctattgccagatttactgcgggttta
ccgagtttctccaagaagaaaagcgcagaaaataagtggtcgcttttcaaagaaggactt
caagggcgtcagattactgatggcttgcgggagaagtataagaataagccatgggtgctg
gaggatgagacaggtcagtcacagtatcaaggtcaccttgagggctcccagtctgcaaat
tattacctgttaatgatgcaggggaaggagtttgtagctattccagctggctcttggtac
aacttcaataaagtggctcactacaagcaacttacacttgaagaagcagaagagaagatg
aagaaccgaaggagaacggcagatggatatcaaaggtggatgatgaaagcagcaaataat
ggacctgctgcatttggagaagttgaggagattgatcttggtaaagagaggactgaagga
gggtctcacaaaaaagtagatattgatgatgatgaaactactacttcagagcaaggggaa
gaagacgaggaggaggagcaggcaaggaagaataggttaggtttcaacataaaaaaattg
gatgatgatgaagaaggtctaagaggaggagatcttgatcttgatgatgatgatattgaa
aagggcgatgattgggagcatgaagaaatattcactgatgatgatgaagctgttggtaat
gatccagaggaaagagaggatttagcccctgcagttcctgcaccaccagaaattaagcag
gatgatgaagatgaagaagatggtaatgaggaggacgggacaaagctgagcaaatcaggc
aaagaactgaaaaagctacttggaaaagctgcaggattgaatgaatctgatgctgatgat
gatgatgaggatgatgatatggatgatgagattggattgtcacctgtgttggctcctaaa
tctaagcagaaagatgcacctaaagaagagcctgttgaaagcagtccttcaaaaccacca
actgctgctcctcgaggaactccatctcaatctaagtcagctaagacaaagagaaaagat
agtggagaggatataaaaccatacagtacacctgcaaaaaagttgaaatctgaaaatgtg
aattctatacgcacatgcgaggattcaaagccttcatctgttaaaaaagaaccatccttc
acttccaaaaatggtgcacatccaaaagtttctttatcttcaaaaagtgggtccacttta
gttacagctcctgtgactgaggaggaaattagggttgttctgttgcagaaggccacagtg
acaacacaggaccttgttgctaagttcaaggcaagattaaggacactggaggacaaatca
gcttttgctgagatcttgaggagaatatctaaaattcagaagacaaatggacccagctac
gttgtgttgagagagaaatga
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