Aristolochia californica: 137954541
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Entry
137954541 CDS
T10486
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137954541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137954541
03009 Ribosome biogenesis [BR:
acak03009
]
137954541
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137954541
Spliceosome [BR:
acak03041
]
Complex A
U1 snRNP components
U1 related factors
137954541
Complex B
137954541
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
Helicases
137954541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137954541
NCBI-ProteinID:
XP_068657775
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MNNRFDVRYGDPNSYRERRSDLVYPPLQLPPAGGPLGGGASGPNFVGPLPPFGASRPVPF
TFGRGGRGSGPAPPVPSAGGLNGRPKFTAGGGFDAGLEGGRGGARVANGDRGRRDFDGGS
RGGRGKEGGGRSGVGGRGFDRGNGIGHGGRGAFDGGRGGGRGFGGGRGGGRSGRDSGRPQ
RSELNNVQLARDCFENLIPFEKNFYVESLAVQAMSDEEVARYRMSRQIRVEGHDVPKPIK
IFTEANFPEYCLQAIRKCGFIEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALV
HVNAQPRLAQGEGPIVLVLAPTRELAVQIQEEAAKFGSQSNVKSTCIYGGAPKGPQIRDL
RKGVEIVIATPGRLIDMLEMHHTNFRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQ
TLYWSATWPREVEALARQFLRDPYKVIIGSSDLKANRSINQIVEVIQESEKYQRLIKLLT
ELMGGSRILIFLETKKGCDQITRQLRMDGWPALSIHGDKSQGERDWVLAEFKSGRSLIMT
ATDVAARGLDVKDIKCVINYDFPGSLEDYIHRIGRTGRAGARGTAFTFFTHANGRFAKDL
IKILQEAGQPVNPSLAGLGRFGGGGGHHGNFRSRGQGFGNKSLISGSNATPLGGARKMW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcgtttcgacgtcagatacggagaccccaattcctaccgcgaaagaagaagt
gacctggtataccctcctctacaactgccgcctgctggaggtcccctgggcggcggcgca
tctggtcctaattttgttggtcctctgccaccttttggtgcttccaggcctgtaccattt
accttcggaagaggcggccgcggatccggtcctgcaccgcctgtcccaagcgccggtggt
ttgaatggtcgcccaaaattcaccgccggaggcggtttcgatgccgggctcgaaggggga
agaggtggcgctagagtcgcaaatggtgatcgtgggaggagggattttgatggaggttca
cgtggggggcgcggaaaggaggggggaggacggagtggggttggtggtagagggtttgat
cgagggaatggtattgggcacgggggcaggggtgcttttgacggcggtcgcggaggcggg
aggggctttggtgggggccgcggtggaggaagaagcgggagggatagtggcaggcctcaa
agatcagagttgaacaatgttcagcttgcgagggattgcttcgagaatctgatcccgttt
gagaagaatttctatgtggaaagtctagctgttcaggccatgtcagatgaagaggtcgct
cgttacagaatgagtcgacaaattcgggtcgaagggcatgatgttccaaagcctatcaaa
atttttacggaggctaacttccccgagtactgcctccaggcgataagaaaatgtggtttt
attgaaccaacacctattcagtcacaaggctggccaatggctttgaagggtagggatcta
attggcattgctgagactggttcagggaaaacattggcgtatcttctgccggcgctggtc
catgtcaatgcacagcctcgattagctcaaggtgagggtcctattgtgcttgtcttagca
cctaccagggaattggctgttcagattcaggaagaagctgcaaagtttggctctcaatct
aatgtcaagagtacctgcatctatggtggtgcaccaaagggtccacaaattcgtgatctt
cgaaaaggagttgaaattgtgattgcgacacctggccgtctaattgatatgctggaaatg
catcacactaactttcggagggtaacatatctcgtattggatgaagcggatcgtatgttg
gacatgggatttgaacctcagattcggaaaattatatctcagattcgaccagacaggcag
acattatattggagtgctacatggccacgagaggtggaggctttggctaggcaattttta
cgtgatccatataaggtaatcattggatcctcagacctgaaagccaaccggtcaattaat
caaattgttgaagttattcaagagagtgaaaagtatcaacggctgatcaaattgttgaca
gaacttatgggtgggagccggatccttatatttttggaaacaaagaaagggtgtgatcag
attacacgacagctcagaatggatggttggcctgccctgtctatccatggtgataaaagc
caaggagagagggactgggtcttggctgaattcaaaagtggcagaagtcttattatgact
gccactgatgtggctgcccgtggtcttgatgtgaaagatataaaatgtgtcattaattat
gatttccccggaagcctcgaggactacattcatagaattggaagaacagggcgagctggt
gcacggggaactgcattcaccttctttacacatgcaaatggaaggtttgccaaggatctc
atcaagatcctacaagaagcaggccaaccagttaacccctctctagctggtctgggacga
tttggtggagggggagggcaccatggaaatttccgttcaagaggacaaggttttggcaac
aagagtttaatttctggttctaatgccactcccctcggtggtgcgaggaagatgtggtaa
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