KEGG   Aristolochia californica: 137955304
Entry
137955304         CDS       T10486                                 
Name
(GenBank) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
acak  Aristolochia californica
Pathway
acak03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137955304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acak03021]
    137955304
Enzymes [BR:acak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137955304
Transcription machinery [BR:acak03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     137955304
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 Tubulin-binding
Other DBs
NCBI-GeneID: 137955304
NCBI-ProteinID: XP_068658293
LinkDB
Position
Unknown
AA seq 1228 aa
MENPSAMEVDSPSSSSSSSSSAEEFASAKNVGDYSNGKVGESFRSFYFEEDTSSSGSEED
FGGLSEAFLGRFCKEASKCFFEKHGLISHQLNSYNDFIKNGLQKVFDDVGEIMVSPTFDP
SQKADGDWKYASIRFGKVRVERPALWIEKKSKDVDVKTGTQAEQEEYLKLLPRHARLMNL
TYSGRLKVHVKWQVYTLQSVTSDKFKTGKESYINRKVLNEWNDEVLFGRLPVMVKSDLCW
LAEEDKNECHFDHGGYFVIKGAEKTFIAQEERCTKRLWVVNHPSWTISYISEVKRRRVYV
KLENLKTDGLSERKTITVWFMGISFPIWILFFALGAASDKEVCQMIDIDIGDPSIANLLI
SSIKDADEKFEGFRKGKNSLKYLAGLMKNLKYPPQESVEECIDSGLFPKLGTQQKALFLG
YMVKCLLLSVFGRRKCDNRDDYRNKRLELAGELLSRELWGHVRHTQRRMVRYMQKDLSGK
GFLKPIQNYIDASIVSNGLVRAFSTGTWSHSYKRLEKSSGVVATLRRTNPLQMMADLRKT
RQQVLYAGMTGDARFPNPSYWGKVCFLSTPDGENCGLVKNLAVTGIVSRNSREPSMDQLI
CCGMEKLDLVSHSSLNGRDKVFVNGVWVGLCSDSSSFARKLRSMRRRKLIDSMVEIKRDQ
SQAEVRIFSDTGRILRPLLFVKNIKKLKKFKTENYSFETLLDEGIIELIGTEEEEDCQTA
WGVKYLLKKDDSQPLMKYTHCELDLSFLLGLSCGIIPFANHNLARRVLYQSEKHSQQAIG
FSTTNPNIRVDTNSQQLYYPQRPLCQSIISECLGKPKYSKGYNDKIPKPEIFNGQNAIVA
VNVHLGYNQEDSLVMNRASLERGLFRTEHTRSYKSEVDNAEILETRRLKLKDPVKFCKVQ
SKLGSVDNLDEDGFPYIGANLQSWEIVIGKAAESGADHSVKLKHTERGRVQKVVLSANDD
GKIFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLEAQENFPFTAQGIVPDIVINPHAFPT
RQTPGQLLEAALGKGIACGGPVKYATPFTAASVEIITEQLHRAGFCRWGTERVYNGRNGE
MMPCLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL
AHGAAANLHERLFRLSDYSHMYICHKCERVTNVILRPTAGGRKIRGPYCRFCESGENILK
VDVPYGAKLLTQELFSMGICLKFKVEEC
NT seq 3687 nt   +upstreamnt  +downstreamnt
atggagaaccctagcgccatggaagtggattcaccttcttcttcttcttcttcttcttca
tccgcggaagaattcgcatctgcgaagaatgtgggagactacagtaacgggaaagtgggt
gagtcttttcgttctttttatttcgaggaagacacgtcttccagtggttccgaggaggat
ttcggtgggttgagtgaggctttcctaggccgtttttgtaaagaggcttccaagtgtttc
tttgaaaaacatgggctcatctctcaccaacttaattcctataacgatttcataaaaaat
gggcttcagaaggtgttcgatgatgttggtgagatcatggtgtcgccaacgtttgaccca
tcccagaaagctgatggggattggaaatatgcatctataagatttggcaaggtaagggtt
gaaaggccagcactgtggattgagaaaaagtccaaggatgtcgatgtcaagacggggact
caagcagagcaagaagagtatttgaagttgctgccaagacacgctcgattgatgaacttg
acgtattctgggcgccttaaagttcatgtgaagtggcaggtctatactttgcagtctgtc
accagtgacaaatttaaaactggtaaagagtcctacattaataggaaagtgctcaatgaa
tggaatgatgaggttctgtttggtagattgccagtgatggtaaaatcagatctttgttgg
ctggctgaagaagataaaaatgagtgtcattttgatcatgggggttattttgtgattaaa
ggtgctgagaagacattcattgcacaagaagagagatgcactaaaagactttgggttgta
aaccatccaagctggacgatttcttacatatcagaagttaagagaaggagggtatatgtg
aaacttgaaaatcttaagacagatggtcttagtgaaaggaaaactattacagtgtggttc
atgggtatttcatttcccatctggatcttattttttgctctaggtgctgcttcagataaa
gaagtctgtcaaatgatagatattgacattggggacccttccattgctaatttgttaatc
tcatctattaaagatgccgatgagaaatttgagggtttccgtaagggaaaaaattcattg
aaatatcttgctggcctgatgaagaatttaaaataccctccccaggaatctgttgaggaa
tgcattgacagcggcttgtttcccaaactaggtacccaacaaaaagctctttttcttggg
tatatggtaaaatgtctcttgctatcagtgtttgggagacgaaagtgtgacaatagagat
gattataggaacaaaaggctagagctggcaggggagttactttcacgtgaattatggggt
catgtccgacatacacagaggcgtatggttagatatatgcagaaagatctgtcaggcaaa
ggatttttaaagccaattcaaaattatattgatgcttcaatagtttctaatggtcttgta
agggccttttcaactggaacatggtctcattcttacaagaggttggagaaatcctctggg
gttgtcgcaactctcaggcgaacaaatcccttgcagatgatggcagacttgagaaagact
cgccagcaggtcctatacgcagggatgactggagatgcaagatttccaaatccatcttac
tggggaaaggtgtgcttcctttctactcctgatggagagaactgtgggcttgtgaagaat
ttggcagtcactggtattgtgagtagaaactcaagagaacctagtatggaccagttgatt
tgttgtggaatggaaaagctagatctggtttctcattcctcattgaatgggcgagataaa
gtttttgttaatggcgtttgggttgggctttgtagtgattctagttcttttgccagaaaa
ctaagaagtatgcgtcgcagaaagctaattgattcaatggtggaaatcaaacgagatcag
tcacaggcagaagtgcgtattttttctgatacgggaagaatcctccggccacttctgttt
gtcaagaacataaagaaattaaaaaaatttaagactgaaaattattcgtttgagactctt
ttagatgaggggatcatagaacttattggtactgaagaagaggaggactgtcaaacagct
tggggtgtcaagtatcttttgaagaaagatgattcccagccattgatgaaatatacacac
tgtgagctggacctttcgttcttgctgggcttaagctgtggaatcataccatttgccaac
cataatttggcaagacgtgtcctctaccaatctgagaaacattctcagcaagctattggg
ttttctacaacaaaccccaatatcagagttgatacaaattctcagcagctttactacccc
cagagacctctgtgtcagagcataatatctgaatgccttgggaaaccaaaatattccaag
ggctataatgataagattccaaaacctgagatatttaatggccaaaatgctatcgtggct
gtaaatgttcatttagggtacaaccaagaagattctttggtcatgaaccgtgcttctctg
gaaaggggcttgtttcgaaccgagcatacaaggagttataaatctgaggttgataatgcg
gagattcttgagactagacggttgaagttgaaggatccagtgaaattttgcaaagtccag
agcaagttagggagtgtggataatcttgatgaagatggattcccctatattggtgctaac
ttgcagtcttgggagattgtcattgggaaagctgctgaatctggtgctgaccacagtgtg
aagctgaaacacacagaaagaggaagagtacagaaagttgtgctgtctgcaaatgatgat
ggaaaaatttttgctgttgtttcgcttcgccaggttaggtctccttgtctgggtgataaa
ttctctagcatgcacggccagaaaggtgtggtgggctttttagaggcacaagagaatttc
ccatttacagctcaaggaatagttccagatattgtgataaatccacatgcatttccaact
aggcaaaccccaggacaacttcttgaggcagctttgggcaaggggattgcgtgtggtggg
cctgtcaaatatgccactcctttcactgctgcttcagttgagatcataactgagcaacta
cacagggctggattttgtcgatggggcactgaacgcgtgtataatggtcggaatggtgaa
atgatgccttgtctgatctttatgggtcccacgttttaccaaaggctggtccatatggct
gaagacaaggtgaaattcaggaatacagggcctgttcaccctcttactcggcaaccggtg
gctgaccggaaaaggtttggtggggtgaaattcggtgaaatggagcgagattgtttactg
gcccatggtgcagctgcgaacttgcatgaacggctcttcaggctgagcgattactctcac
atgtatatttgccacaaatgcgagagagtaacaaatgttatcctgagacccaccgccgga
ggccggaagatccggggtccatactgtcgtttctgcgaatcaggggagaatatcttaaaa
gtcgatgtgccttatggtgccaagttgctaacccaagagcttttcagtatgggcatctgt
ctcaaattcaaagttgaagagtgttga

DBGET integrated database retrieval system