Aristolochia californica: 137955361
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Entry
137955361 CDS
T10486
Name
(GenBank) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137955361
09123 Folding, sorting and degradation
03018 RNA degradation
137955361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137955361
03041 Spliceosome [BR:
acak03041
]
137955361
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137955361
mRNA degradation factors
5'-3' decay
Lsm complex
137955361
Spliceosome [BR:
acak03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137955361
Complex C
U2 snRNP components
137955361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF150_C
Motif
Other DBs
NCBI-GeneID:
137955361
NCBI-ProteinID:
XP_068658371
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLFFSYFKELVGKEVTVELKNDLAIRGILHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIDILHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcttctcatatttcaaggagttagtaggcaaagaagtgacggtggagttgaag
aatgatctggccattcgagggattctgcactccgtagatcaatatctcaatataaagctg
gaaaacacgagggtggtcgatcaagacaaatatcctcacatgttatcagtaagaaattgt
ttcataagaggatcagtggtgaggtatgttcagcttcccccggatggagttgacattgat
attcttcacgacgccacaaggcgagaggcccgtggtggttga
DBGET
integrated database retrieval system