Aristolochia californica: 137955573
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Entry
137955573 CDS
T10486
Name
(GenBank) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137955573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acak03036
]
137955573
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
137955573
INO80 complex (yeast)
137955573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
137955573
NCBI-ProteinID:
XP_068658678
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MEQKRHSNNGFSYSNLFNLESLMNFQLPQQDDDFGNYGNSSQDESRGSQGQDKMAGNGFV
VTSELGVTKRKRTLIEPEAGSNSSAWRDPDSNDEDEEDYGTYISEERYRSMLGEHLQKYR
RVRFKESSSLALTSSRGGMPMPKRSNHSSRSRKFSNEERGLHAVEPTSDFLAGMPSKQAA
YYEPDFTSEFAGVDRFSSPSFDSLYLDIGEGITYRIPPTYDKLVTSLKLPSFWDVRVEEY
FLKGTLDLRSLAAMMASDRRLESRNRSGMGDPQPQYYSLQARLKALSASNSVQKFSLQVC
DNGLESSIPEGAAGGIQRSIMSEGGTLQVYYVKVLEKGDTYEIIERRLPMKQELQKDPSV
IEKEEMEKLSKVWVNMVRKDIPKHHKAFVNLHRKQISDAKRSAETCQREVKLKVSRSLKL
MRGAAIRTRKLARDMLVFWKRVDKEQAEIRKKEEKEAAEALKREEELREAKRQQQRLNFL
LSQTELYSHFMQNKSTSENLALADGEGNQEALSEMPGEEEDPEDAELKREALRAAQQAVS
QQKKITSAFDTECKKLREAIESEAEANDNSIAGSSDMDLLHPSTMPTKSSVQTPELFKGF
LKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPTS
VLNNWADEFNRFCPDLKTLPYWGGLRERMILRKNINPKRLYRRDSGFHILITSYQLLVSD
EKYFQRVKWQYMVLDEAQAIKSSASIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHF
IMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVILEMTG
KKEVTVHCKLSSRQQAFYQAIKNKISLAELFDGRRGHLNEKKLLNLMNIVIQLRKVCNHP
ELFERNEGTTYLYFGEIPNSLLPPPFGESEDIHYSGDLNPIVYEVPKLVYEEIMRHPEIP
CSPFGHSIGRESFEKLFNIFSPENVYQSIFPQNTCMNDSTLMSGTFGFTHLSDLSPEEIS
FLAKGSILERLLFSVSRWDQQLLNDVLDKFMATEGDDIVNDHMDKEKVRCVTRMLLLPTK
SESMLLRRKLARGPSDTLFEALVTSHQDWFISNTRLLHSAYAFIPPARAPPISAHCSDRN
FAYKMAEELHHPWVKRLFLGFARTSESNGPRVPSRPHHLIQEVDSELPVAEPLLQLTYKI
FGSSPPVRNFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRK
YRYLRLDGSSTIMDRHDMVREFQCRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPT
LDLQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDYMPA
EDVVSLLLDDNQLEQKLREAPPHQAKYRQKKKRAMKGIRIDAEGDATLEDISALESQAAV
NEPSNELENGKLSNKKRKANPDTHMVPKPQIISKGSKNVDAFSETKDPNLLDYEGNEDPQ
QKPNKPKRMKKNIKENLETAVDATLVVALGPAEHPLQNSNFSALESREYLEEEIPSDGLS
PAR
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaagcgccactcgaataacggattttcgtactcgaatcttttcaacctcgag
tctttgatgaactttcaacttccacaacaagatgatgattttggtaattatgggaatagt
agtcaggatgagagcagaggtagccaaggtcaagataaaatggcgggtaatgggtttgtt
gtgacatcagaattgggcgtgacaaagcggaagcggactctcattgagccggaggctggg
tccaattcatctgcctggcgagaccctgatagcaacgacgaagatgaagaagattacgga
acatacatatcggaggagcgataccgctccatgcttggtgagcaccttcagaagtaccgc
agggtgaggttcaaagagtcttcttcgttggccctcacttcttctcgaggaggaatgcct
atgcctaagcgtagtaatcatagctctaggagtcggaaattcagcaatgaggagaggggt
ttgcatgcagtagaacccacttcagactttcttgctggtatgcccagtaagcaggctgct
tattatgagccagactttacttcagagtttgctggggttgatagattttcgtcaccctct
tttgattcactttatctggatattggagagggtatcacatatagaattccacctacttat
gataaactcgtgacaagtttgaaactgccaagcttttgggatgttcgggtagaagagtat
tttctgaagggcacgcttgatttgagatctctagctgcaatgatggctagtgataggagg
ttggagtctcgcaaccggtcaggcatgggggatccacagccccaatactattcgctccag
gcaaggcttaaggcgttgtcagcatctaattcagttcagaaattcagtctccaagtttgt
gataatggtctggaatcctctattcctgagggagccgctggtgggatacagaggtcaatt
atgtctgaagggggcactttgcaagtttactatgtaaaagtcttggaaaaaggagacact
tatgagataattgaacgcagattacctatgaaacaagaactgcagaaagatccttcagtg
attgagaaagaggaaatggagaagctcagcaaggtttgggtcaatatggtcagaaaggac
atccctaagcatcataaggcttttgttaacttgcacaggaagcagattagtgatgccaag
aggtctgcagagacttgtcaaagagaggtgaaattgaaggtgagcaggtctctcaaactg
atgaggggagcagcaattcgcactagaaaactggcgagagacatgcttgtcttctggaaa
agagtagataaggagcaggcagaaataaggaaaaaagaggaaaaagaggcagcggaggct
ttgaagcgtgaagaagagcttcgagaggcaaagaggcagcaacagaggctcaattttctg
ttgtcacaaacagaactttacagtcatttcatgcagaacaagtcaacatctgaaaatttg
gctttagctgacggagaaggtaatcaggaagctctgtcagagatgcctggtgaggaagag
gatcctgaggatgctgaattgaaaagggaggccttaagagcagcccaacaggcagtgtcg
cagcagaagaagataaccagtgcatttgatactgaatgtaagaagctacgggaggcaatt
gaatctgaagctgaggcaaatgataactcaattgcagggtctagtgacatggacctgctt
cacccctcgactatgccaactaaatcttcagttcagacaccagaattatttaaaggtttc
cttaaagagtaccagttgaagggcttgcagtggctagttaattgttatgagcagggcttg
aatggtatccttgcagatgagatgggcctgggaaagacaatccaagccatggcattcttg
gcgcatctagctgaggagaaaaatatatggggcccttttctagtggttgctcctacctca
gtcttgaataattgggctgatgagtttaatcggttctgccctgacttgaaaactcttcca
tactggggagggcttcgggagaggatgatactgaggaaaaacataaacccaaagcgcctt
tacaggagggattctggattccacattctcattactagctatcagcttttagtttctgat
gaaaaatactttcaacgtgtgaagtggcaatatatggtattggatgaagctcaggcaatt
aagagttcagctagtataaggtggaaaactttactcagtttcaactgtagaaaccgattg
ttgctgacagggacacctatacagaataacatggcagagttgtgggctcttcttcatttt
atcatgcccaccctatttgacagccatgaacagttcaatgaatggttttcaaaaggcatc
gaaaaccatgcagaacatggaggcactctaaatgagcaccagctcaatagactgcatgca
gtcctgaagccttttatgttacgtcgggttaagaaagatgtgatcctggagatgactggt
aaaaaagaagtaactgtgcattgcaaattaagttccagacagcaagctttttatcaagca
atcaagaacaaaatctctcttgctgaattgtttgatggcagacgggggcatcttaatgag
aagaagcttcttaatttgatgaacatcgttattcagttaagaaaggtgtgcaaccatcca
gagttgtttgaacgcaatgaaggaaccacttatctttattttggggagatccctaattcg
cttcttcctcctccctttggggaatcagaggacatacattactcaggggatctaaatcct
attgtatatgaggtacctaagctggtttatgaagaaataatgaggcatcctgaaattcct
tgttcaccctttggtcatagtattgggagagaatcatttgaaaagcttttcaacatattt
tctcctgagaatgtttatcaatccatattccctcaaaatacatgcatgaatgactctacc
ttaatgagcggaacatttggttttacccacttatcagatttgtctccagaagagatttct
tttctggctaagggttctattttggagaggcttctgttttctgtttcaaggtgggaccag
caattgttgaatgatgtgttggacaaatttatggcaactgagggggatgatattgtgaat
gatcatatggataaggagaaggtgagatgtgtcacacgtatgctacttttgccaactaaa
tctgaatctatgttgctcagaaggaaacttgccagaggcccgagtgataccctgttcgag
gcattagtcacctctcatcaagattggtttatatccaacaccaggcttctccattcagct
tatgcattcatcccaccagctcgtgcgccgccaattagtgctcattgttctgatagaaat
tttgcatacaaaatggctgaagaactacaccatccttgggtcaaaaggctgtttcttgga
tttgctcgtacatctgaatccaatggacccagagtgccaagtaggcctcatcatttgatt
caagaggtagactctgagctacctgttgcagaacctcttcttcaactgacttacaagatt
tttgggtcctctccacccgtgcgaaactttgatccagcaaaattgcttacggactctggt
aagcttcagactctggatattttactgaagcgattgcgagctgaaaatcaccgtgtgctc
ttatttgcacaaatgacaaaaatgctcaatattcttgaggactatatgaactatagaaag
tataggtatttacgactcgatgggtcatccaccatcatggatcggcatgacatggtcaga
gagttccagtgccggagtgatatttttgtctttttgttaagtacaagagccggagggctg
ggtatcaacttgacagctgctgacactgttatattttatgaaagtgattggaatcctacg
ttagatctgcaggctatggacagagctcatcgactgggccagaccaaagaggtcactgta
tacagattgatctgcaaggagacagttgaggagaagattctgcaaagggctagtcagaaa
aatactgtgcaacagcttgtaatgacaggtggccatgttcaaggagattatatgccagct
gaagatgtggtttctctacttcttgatgataatcagctggaacagaaactaagagaagcc
ccaccgcatcaggctaaatatcggcagaagaaaaagcgtgctatgaagggcattcggata
gatgccgaaggggatgcaacgttggaggacatttctgcccttgaatcacaggctgcagtg
aatgaacctagcaatgagctggagaatggaaaattatcaaataaaaagagaaaagcaaat
ccggacacacatatggttccaaaaccacaaattatctcaaaaggttccaagaatgtggat
gccttttcggaaacaaaggatcctaacttgctagactatgaggggaatgaagatccacaa
caaaaacccaataaaccaaagaggatgaagaaaaacataaaggagaatcttgaaacagcg
gttgatgccactttggtggtagctttgggccctgctgagcatccacttcaaaatagtaat
ttctccgctcttgaatcaagagaataccttgaggaagaaattccatctgatggcctctca
ccagccaggtaa
DBGET
integrated database retrieval system
